Part of scaffold_12 (Scaffold)

For more information consult the page for scaffold_12 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D7 ENSTTRG00000001053 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000991, Bottlenosed dolphin)

Protein Percentage 91.2%
cDNA percentage 92.37%
Ka/Ks Ratio 0.57675 (Ka = 0.0688, Ks = 0.1193)

BT.21021 ENSBTAG00000017160 (Cow)

Gene Details

TBC1 domain family member 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022819, Cow)

Protein Percentage 85.21%
cDNA percentage 85.68%
Ka/Ks Ratio 0.29721 (Ka = 0.1045, Ks = 0.3515)

TBC1D7  (Minke Whale)

Gene Details

TBC1 domain family, member 7

External Links

Gene match (Identifier: BACU005154, Minke Whale)

Protein Percentage 97.37%
cDNA percentage 98.12%
Ka/Ks Ratio 0.50029 (Ka = 0.0148, Ks = 0.0295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1068 bp    Location:382051..362585   Strand:-
>bmy_00667
ATGACTGAGGACTCCCAGAGAAACTTCCGTTCAGTATATTATGAAAAAGTGGGGTTTCGTGGAGTTGAAGAAAAGAAATCATTAGAAATTCTCCTAAAAGATGACTGTCTGGATATTGAGAAACTTTGTACTTTTAGTCAGAGGTTCCCGCTCCCGTCCATGTACCGTGCATTGGTCTGGAAGGTGCTTCTAGGCATCTTGCCTCCACACCATGAGTCCCATGCCCAGGTGATGATGTATCGCAAGGCGCAGTACTCCGATGTCCTTCACGCCCTGGAAGTCATTCGCTTTATCAGTGATGCCACACCTCAGGTTGAAGTCTATCTCTACATGCATCGGCTGGAGTCTGGGAAGTTGCCTCGAAGTCCCTCCTTTCCACTGGAGCCAGAAGATGAAGTATTTCTTGCCATTGCTAAAGCCATGGAAGAGATGGTGGAAGATGGCATTGACTGTTACTGGCTCACCCGATGCTTTGTGAACCAACTGAATAACAAGTACCGGGATTTTCTACCCCAGCTGCCAAAGGCTTTTGAACAATACTTGAACCTGGAAGATAGCCGACTGCTGAGTCATCTGAAGACGAGTTCTGCAGTGTCCAAACTTCCCTATGATCTCTGGTTCAAGAGGTGCTTCGCCGGGGTTTGGGATAAAGTTATAAGTGGATCCTGTAAGATACTAGTTTTTGTAGCTGTGGAAATTCTCTTAACCTTTAAAATAAAAGTAATGGCACTGAACAGTGCAGAGAAGATAACAAAGTTTCTGGAAAACAGACATAGTGTAGTTTTACGTTATAAGAAACAATTTTCCCCTGAAAAAGTTTCAAGTTGGTCTGTGGATGGTAGTGCAGTCCTTTGGGGTCAGTGGTCTGAGCAGCAGGTCTCCAATACCCTTAACCAGGCAAAAAGAGGTGGAAATCCCCCAGGACAGCTCGGATGCGATTGTGAGCAAGGCCATCGACTTATGGCACAAACACTGCGGGACCCCGGTCCACTCCGCCTGAACATGCCTGACATTGTGGACAGTCTGCCAGGCCTGCCCAGAGGGCTTTTCTGGGACGTGATCTACTAA

Related Sequences

bmy_00667T0 Protein

Length: 356 aa      View alignments
>bmy_00667T0
MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDCLDIEKLCTFSQRFPLPSMYRALVWKVLLGILPPHHESHAQVMMYRKAQYSDVLHALEVIRFISDATPQVEVYLYMHRLESGKLPRSPSFPLEPEDEVFLAIAKAMEEMVEDGIDCYWLTRCFVNQLNNKYRDFLPQLPKAFEQYLNLEDSRLLSHLKTSSAVSKLPYDLWFKRCFAGVWDKVISGSCKILVFVAVEILLTFKIKVMALNSAEKITKFLENRHSVVLRYKKQFSPEKVSSWSVDGSAVLWGQWSEQQVSNTLNQAKRGGNPPGQLGCDCEQGHRLMAQTLRDPGPLRLNMPDIVDSLPGLPRGLFWDVIY*