Part of scaffold_12 (Scaffold)

For more information consult the page for scaffold_12 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF182 ENSTTRG00000012121 (Bottlenosed dolphin)

Gene Details

ring finger protein 182

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011495, Bottlenosed dolphin)

Protein Percentage 97.17%
cDNA percentage 97.3%
Ka/Ks Ratio 0.11286 (Ka = 0.0103, Ks = 0.0913)

BT.62029 ENSBTAG00000045884 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF182

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056620, Cow)

Protein Percentage 93.93%
cDNA percentage 91.77%
Ka/Ks Ratio 0.0476 (Ka = 0.0236, Ks = 0.4956)

RNF182  (Minke Whale)

Gene Details

ring finger protein 182

External Links

Gene match (Identifier: BACU005161, Minke Whale)

Protein Percentage 98.79%
cDNA percentage 98.52%
Ka/Ks Ratio 0.05676 (Ka = 0.0034, Ks = 0.0599)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 744 bp    Location:864147..864890   Strand:+
>bmy_00674
ATGGCCGGTCAGCTGCCAGAGGATGCCGCTGAGTCTCAGGTCTCGGACGAGCTGGAGTGTAAGATCTGTTACAACCGGTACAACCTGAGACAGAGGAAACCCAAAGTGCTGGAGTGCTGTCACAGGGTGTGTGCCAAATGCCTCYACAAGATCATAGACTTCGGGGACTCCCCGCGCGGCGTCATCGTCTGCCCTTTCTGCAGGTTTGAGACGTGCCTGCCGGATGATGAAGTCAGCAGCCTGCCCGATGACAACAACATCCTGGTGAACTTGACTTGTGGCGGCAAAGGCAAGAAGTGCCTGCCCGAGAACCCCACGGAGCTGCTGCTGACCCCCAAGCGGCTGGCCTCGCTGGTCAGCCCTTCCCACGCGTCCTCCAACTGCCTGGTCATCACGATCATGGAGGTGCAGAGGGAGAGCTCACCGTCGCTCAGCTCCACGCCCGTGGTCGAGTTCTACAGGCCCTCCAGCTTCGACTCCGCGACCACCATGTCGCACAACTGGACCGTGTGGAACTGCACGTCCCTGCTCTTTCAGACGTCCATCCGGGTGTTGGTATGGTTGCTAGGCTTGCTGTACTTCAGCTCCTTGCCCTTGGGCATCTACTTACTAGTGTCCAAGAAGGTCACCCTCGGGGTCATCTTCGTCAGCCTCGTCCCTTCCAGCCTCGTCATCCTGATGGTATACGGCTTCTGCCAGTGTGTCTGTCACGAATTCCTAGACTGTTTGGCACCGTCCTCTTAA

Related Sequences

bmy_00674T0 Protein

Length: 248 aa      View alignments
>bmy_00674T0
MAGQLPEDAAESQVSDELECKICYNRYNLRQRKPKVLECCHRVCAKCLXKIIDFGDSPRGVIVCPFCRFETCLPDDEVSSLPDDNNILVNLTCGGKGKKCLPENPTELLLTPKRLASLVSPSHASSNCLVITIMEVQRESSPSLSSTPVVEFYRPSSFDSATTMSHNWTVWNCTSLLFQTSIRVLVWLLGLLYFSSLPLGIYLLVSKKVTLGVIFVSLVPSSLVILMVYGFCQCVCHEFLDCLAPSS*