Sequence detailsbmy_00675 (Coding sequence)

Part of scaffold_12 (SequenceType object (1))

For more information consult the page for scaffold_12 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD83ENSTTRG00000012972 (Bottlenosed dolphin)

Gene Details

CD83 molecule

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012304, Bottlenosed dolphin)

Protein Percentage 57.53%
cDNA percentage 68.04%
Ka/Ks Ratio 1.27179 (Ka = 0.4582, Ks = 0.3603)

CD83ENSBTAG00000031430 (Cow)

Gene Details

CD83 antigen precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042033, Cow)

Protein Percentage 76.39%
cDNA percentage 81.94%
Ka/Ks Ratio 0.58048 (Ka = 0.1792, Ks = 0.3087)

CD83 (Minke Whale)

Gene Details

CD83 molecule

External Links

Gene match (Identifier: BACU005163, Minke Whale)

Protein Percentage 84.72%
cDNA percentage 87.5%
Ka/Ks Ratio 0.5937 (Ka = 0.1197, Ks = 0.2016)

Additional orthologs identified in other species via the OPTIC pipeline.

CD83 (Human)   Cd83 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 456 bp    Location:966749..990712   Strand:+
Raw sequence 
>bmy_00675
AAAGCGAAGATCAAGCCATCTGTAAACTCCGTTCTCCTGTTCAAGGAAGACCCCCAAGCCTGCAGCCTGGTGCCCGCGGCGCGGGAGGTGAAGGTGGCCTGTTCGGAGGATGTGGACTTGCCCTGCACTGCCCCCTGGGATCCGCAGGTCCCCTACGCGGTCTTCTGGGCCAAGAGGCGTGAGCGTGGTACATCCTGCCGCGTCACAGATGACCCCACAGGATGCTCTAAGGGACGCAGAGAAGAGACTTTTAAGAAATACAGAGCTGAGGTTGTCCTGCTGTTGGCTCTGGTCATTTTCTACGTAACACTCATCATTTTCACTTGCAAGTTTGCACGACAGCAGAGTATATTTCCTGACTTTCTTAAACCTGCCATGGAACATGCTTTTCTCCCAGTTACCTCCCCAAATAAGCATTTGGAGCCAGTGACTCTTCACAAGACAGAACTGGTGTGA

Related Sequences

bmy_00675T0 SequenceType object (3)

Length: 152 aa      View alignments
>bmy_00675T0
KAKIKPSVNSVLLFKEDPQACSLVPAAREVKVACSEDVDLPCTAPWDPQVPYAVFWAKRRERGTSCRVTDDPTGCSKGRREETFKKYRAEVVLLLALVIFYVTLIIFTCKFARQQSIFPDFLKPAMEHAFLPVTSPNKHLEPVTLHKTELV*