Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000002893 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002713, Bottlenosed dolphin)

Protein Percentage 99.12%
cDNA percentage 99.12%
Ka/Ks Ratio 0.18712 (Ka = 0.0041, Ks = 0.0219)

RABGEF1 ENSBTAG00000003842 (Cow)

Gene Details

Rab5 GDP/GTP exchange factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005011, Cow)

Protein Percentage 98.54%
cDNA percentage 95.81%
Ka/Ks Ratio 0.04225 (Ka = 0.0068, Ks = 0.1601)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location:53511..34894   Strand:-
>bmy_00690
GAAATTCAGGAACCAAAAGCTCCCAGTCCTTCTACAAACCGGCAAACCAGCATTGAAACGGATAGAGATTTAAGCATTGAGGAACAGTCAGAGTGTACTCAGGATTTTTACCAGAATGTGGCTGAGAGAATGCAGACTCGTGGAAAAGTGCCTCCAGAAAGAGTTGAGAAGATAATGGATCAGATTGAAAAGTACATCATGACTCGTCTCTATAAATATGTGTTCTGTCCAGAAACTACTGATGATGAGAAGAAAGATCTCGCTATTCAAAAAAGGATCAGAGCCCTGCACTGGGTTACACCTCAGATGCTTTGTGTCCCTGTTAATGAAGAAATTCCAGAAGTGTCTGATATGGTGGTGAAAGCAATTACAGATATCATTGAAATGGATTCAAAGCGTGTGCCCCGGGATAAGTTGGCCTGCATCACCAAGTGCAGCAAGCACATCTTCAATGCCATCAAGATCACCAAGAACGAGCCAGCTTCAGCTGATGACTTCTTACCCACTCTCATCTACATTGTTTTGAAGGGCAACCCCCCACGCCTTCAGTCCAATATCCAGTATATCACCCGCTTCTGCAACCCAAGCCGATTGATGACTGGAGAGGATGGCTACTATTTCACCAACCTGTGTTGTGCCGTGGCTTTCATTGAGAAATTAGACGCTCAATCTTTGAATTTAAGTCAGGAAGATTTTGATCGATACATGTCTGGCCAGACTTCCCCCAGGAAGCAGGAATCTGAGAATTGGTCTCCTGATGCTTGCTTAGGTGTTAAGCAGATGTATAAGAATTTGGATCTCCTGTCTCAATTGAATGAACGGCAGGAAAGGATTATGAATGAAGCCAAGAAGCTTGAGAAAGACCTAATAGATTGGACGGATGGAATCGCAAAAGAGGTTCAAGACATTGTTGAGAAATACCCGCTTGAAATTAGGCCCCCAAGTCAGTCTTTAGCATCTATTGACTCTGAAAATGTTGAAAATGATAAACTTCCTCCACCGTTGCAACCTCAAGTTTATGCAGGA

Related Sequences

bmy_00690T0 Protein

Length: 342 aa      View alignments
>bmy_00690T0
EIQEPKAPSPSTNRQTSIETDRDLSIEEQSECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIRPPSQSLASIDSENVENDKLPPPLQPQVYAG