Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GBAS ENSTTRG00000015145 (Bottlenosed dolphin)

Gene Details

glioblastoma amplified sequence

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014356, Bottlenosed dolphin)

Protein Percentage 98.43%
cDNA percentage 98.82%
Ka/Ks Ratio 0.3327 (Ka = 0.0076, Ks = 0.0227)

GBAS ENSBTAG00000031598 (Cow)

Gene Details

protein NipSnap homolog 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042249, Cow)

Protein Percentage 96.47%
cDNA percentage 94.64%
Ka/Ks Ratio 0.11386 (Ka = 0.0177, Ks = 0.1555)

GBAS  (Minke Whale)

Gene Details

glioblastoma amplified sequence

External Links

Gene match (Identifier: BACU011973, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.44%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 843 bp    Location:624048..606837   Strand:-
>bmy_00706
AAATTGGCGTTTTCCAATAACAGACCTCGAGAGGACAGCTGGTTAAAATCCTTATTTGTCCGGAAAGTTGATCCAAGGAAAGATGCTCACTCTAATCTCCTAGCCAAAAAGGAAACAAGCAGTCTGTACAAATTACAGTTTCACAATGTTAAACCGGAATGCCTAGAAGCATACAACAAAATTTGTCAAGAGGTGTTGCCAAAGATTCATGAAGATAAACATTACCCTTGTACTTTGGTGGGGACTTGGAACACGTGGTATGGCGAGCAGGATCAAGCTGTTCACCTCTGGAGGTATGAAGGAGGTTATCCAGTCCTCACGGAGGTCATGAATAAACTCAAAGAAAATCAGGAATTTGCGGAATTCCGTAAGGCGAGAAGCAACATGCTTCTCTCGAGGAAGAATCAGCTGCTATTGGAGTTCAGTTTCTGGAATGAGCCTGTCCCACGGTCAGGACCGAATATATATGAACTCAGATCTTACCAGCTCCGAGTAAATGAAGCCACAGAATATTACTTCCACTATGGGATAGAAGAACTAACAAACCAAATCCAAATCTCTTTTCAGCCAGGAACTATGATTGAATGGGGCAATTACTGGGCTCGTGCAATTCGCTTCAGACAGGACAGTAATGAAGCAGTTGGAGGATTCTTCTCCCAGATTGGGCAGCTGTATATGGTGCATCATCTTTGGGCTTACAAGGATCTTCAGACCAGGGAAGATATACGGAATGCAGCATGGCATAAACACGGCTGGGAAGAACTGGTATATTATACAGTCCCACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACAGAAGACTTCACCCCTCCAGTAA

Related Sequences

bmy_00706T0 Protein

Length: 281 aa      View alignments
>bmy_00706T0
KLAFSNNRPREDSWLKSLFVRKVDPRKDAHSNLLAKKETSSLYKLQFHNVKPECLEAYNKICQEVLPKIHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPVLTEVMNKLKENQEFAEFRKARSNMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRVNEATEYYFHYGIEELTNQIQISFQPGTMIEWGNYWARAIRFRQDSNEAVGGFFSQIGQLYMVHHLWAYKDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPQKTSPLQ*