Part of scaffold_13 (SequenceType object (1))

For more information consult the page for scaffold_13 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GBASENSTTRG00000015145 (Bottlenosed dolphin)

Gene Details

glioblastoma amplified sequence

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014356, Bottlenosed dolphin)

Protein Percentage 98.43%
cDNA percentage 98.82%
Ka/Ks Ratio 0.3327 (Ka = 0.0076, Ks = 0.0227)

GBASENSBTAG00000031598 (Cow)

Gene Details

protein NipSnap homolog 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042249, Cow)

Protein Percentage 96.47%
cDNA percentage 94.64%
Ka/Ks Ratio 0.11386 (Ka = 0.0177, Ks = 0.1555)

GBAS (Minke Whale)

Gene Details

glioblastoma amplified sequence

External Links

Gene match (Identifier: BACU011973, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.44%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 843 bp    Location:624048..606837   Strand:-
>bmy_00706
AAATTGGCGTTTTCCAATAACAGACCTCGAGAGGACAGCTGGTTAAAATCCTTATTTGTCCGGAAAGTTGATCCAAGGAAAGATGCTCACTCTAATCTCCTAGCCAAAAAGGAAACAAGCAGTCTGTACAAATTACAGTTTCACAATGTTAAACCGGAATGCCTAGAAGCATACAACAAAATTTGTCAAGAGGTGTTGCCAAAGATTCATGAAGATAAACATTACCCTTGTACTTTGGTGGGGACTTGGAACACGTGGTATGGCGAGCAGGATCAAGCTGTTCACCTCTGGAGGTATGAAGGAGGTTATCCAGTCCTCACGGAGGTCATGAATAAACTCAAAGAAAATCAGGAATTTGCGGAATTCCGTAAGGCGAGAAGCAACATGCTTCTCTCGAGGAAGAATCAGCTGCTATTGGAGTTCAGTTTCTGGAATGAGCCTGTCCCACGGTCAGGACCGAATATATATGAACTCAGATCTTACCAGCTCCGAGTAAATGAAGCCACAGAATATTACTTCCACTATGGGATAGAAGAACTAACAAACCAAATCCAAATCTCTTTTCAGCCAGGAACTATGATTGAATGGGGCAATTACTGGGCTCGTGCAATTCGCTTCAGACAGGACAGTAATGAAGCAGTTGGAGGATTCTTCTCCCAGATTGGGCAGCTGTATATGGTGCATCATCTTTGGGCTTACAAGGATCTTCAGACCAGGGAAGATATACGGAATGCAGCATGGCATAAACACGGCTGGGAAGAACTGGTATATTATACAGTCCCACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACAGAAGACTTCACCCCTCCAGTAA

Related Sequences

bmy_00706T0 SequenceType object (3)

Length: 281 aa      View alignments
>bmy_00706T0
KLAFSNNRPREDSWLKSLFVRKVDPRKDAHSNLLAKKETSSLYKLQFHNVKPECLEAYNKICQEVLPKIHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPVLTEVMNKLKENQEFAEFRKARSNMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRVNEATEYYFHYGIEELTNQIQISFQPGTMIEWGNYWARAIRFRQDSNEAVGGFFSQIGQLYMVHHLWAYKDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPQKTSPLQ*