Sequence detailsbmy_00716 (Coding sequence)

Part of scaffold_13 (SequenceType object (1))

For more information consult the page for scaffold_13 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGADENSTTRG00000012446 (Bottlenosed dolphin)

Gene Details

integrin, alpha D

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011819, Bottlenosed dolphin)

Protein Percentage 42.66%
cDNA percentage 52.78%
Ka/Ks Ratio 0.46613 (Ka = 0.4758, Ks = 1.0207)

ITGADENSBTAG00000019524 (Cow)

Gene Details

integrin alpha-D precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026008, Cow)

Protein Percentage 74.67%
cDNA percentage 81.49%
Ka/Ks Ratio 0.51942 (Ka = 0.1819, Ks = 0.3502)

ITGAD (Minke Whale)

Gene Details

integrin, alpha D

External Links

Gene match (Identifier: BACU011965, Minke Whale)

Protein Percentage 89.63%
cDNA percentage 91.25%
Ka/Ks Ratio 0.42907 (Ka = 0.0725, Ks = 0.169)

Genome Location

Sequence SequenceType object (2)

Length: 3234 bp    Location:826602..800897   Strand:-
Raw sequence 
>bmy_00716
ATGCGCTGCCCGGGGATGGCCTTTGGAGTTGTGCTGCTTCTGGCTGTCCTGGCTTCTTATCATGGATTCAACTTGGATGTGGAGGAGCCCATGGTCTTCCAAGAGGACGGAGCCGGCTTTGGGCAGAGCGTGACTCGTGGTGGGAGCCCCCCTGGAGGTGGTCGCAGTCAACAAAACAGGACGTTTGTACGACTGCCTGGCTGCCACCGGCTTGTGTCAGCCCATCTTGCTGAATACACCCCTAGAGGCCGTGAACATGTCCTTGGGCCTGTCCCTGGTGGCCTCCACCGATCTCTCCTGGCTGCTGGTGAGCGTTTCTGGGTCCCAGGAGGGTCTCGAGGGAGGAACAGGGGCCAGAGGAGGCTGGGGCTGGGCGAGAAGGAGGGGAAGTGTTCTGGGGGCCTCCTCGCCCACACAGGCCTCTGTCCCCAGGCCTGCGGCCCGACCATGCACAGAGCCTGTGGGGAGAACATGTACGCAAAAGGCACTTGCCTCCTGCTGGGCTCCCACCTGCAGATCATCCGGACAGTCCCCGCCACCCTGCCAGAGTGTCCAAATCAAGAGATAGACATTGTCTTCCTAATTGATGGCTCTGGCAGCATTGTCCGAAATGACTTTAAACGGATGAAGAACTTTGTCAGAGCTGTGATGGACCAGTTCAAGGGCACCCACACACTGGTGAAGGCTGGGCCCCCGAGGCCTGGGGATTGGGATCGGGGAGGGTCTACCTCTGGGAAGGCCAACCTGGGAGGGGGCCTGGCATCGCTGGGAGCTGGCTCAGTGGACTTGTGCCATGACGAGGCCAGGGTCCAAGGTCAAGGGCCCTCTTCTTGGCCTTCACAGTTCTCGCTGATGCAATACTCAAACCTTCTGAAGACCCACTTCACCTTCAGCCAATTTCAGACCAGCCGGAGCCCTCAGAGCCTGGTGGATCCCATCGTCCAACTGAGTGGCCTGACATTCACAGCCACGGGCATCCAGACAGTGGTGAAAGAACTATTTCACAGTAAGAATGGGGCCCGTAAAACTGCCAAGAAGATCCTCATTGTCATCACAGATGGGCAGAAATATAAAGACCCCCTGAAATACAGCGACGTCATCCCCCAGGCAGACAGAGCCAACATCATCCGCTATGCCATTGGGGTGGGAGATGCTTTCCAGGATCCCACTGCCAGGCAGGAGCTGAACATCATTGGCTCGGTGCCTTCGGAGGACCACGTGTTCAAGGTGGACAACTTTGCAGCACTCAGCAACATCCAGACGCAGCTGCAGGAGAAGATCTTTGCAGATGGACCAGTTCTGGGGGCTGTGGGGAGCTTCAGCTGGTCTGGAGGTGCCTTCCTGTACCCCCCAAATAGGAGCCCCACCTTCATCAACATGTCTCAGGAGCACGCGGACATGAGGGACTCTTACCTGGCGGATTGCAGGCTCCCAGCTCTCCCCCAGGCTCCAGTATTTCGGGCATTCACTGAGCGGGGGTCAGGACCTCACCCAGGATGGGCTGGTGGACCTGGCCGTCGGGGCCCAGGGGCACGCGCTGCTGCTCAGAGGCCCATCCTCAGCCTCTCATGCACCCGCAGGAGCCTGCCGGTGCTGAACGTGGAGGTGGCTGTGAGATTCACGCCCCCGGAGGTGACAAAGTCTGTGTACCAGTGCTGGGAAGAGCTGCCCACCGCCCTGGAAGCTGGGGACGCCACAGTCTGTCTCACTATCCACAAAAGCTCACAGGATCAGCTAGGTGACGTCCGAAGCTCTGTCATGTACGATCTGGCATTGGACCCAGGTCGTCTGATTTCTCGTGCCATTTTTGATGAGACCAAGAACTGGACTTTGACTCGAAGAAAAACCCTAGGGCTGGGAGAGCACTGTGACACCATGAAGCTGCTTTTACCAGACTGTGTGGAGGACGTGGGGAACCCCATCATCCTGAGACTCAACTTMTCCCTGGTTGGGGAGCCCATCTCTTCATCTCAGAACCTACGCCCTGTGCTGGCTGTGGGCTCACAGGACCGCTTCACTGCTTCTCTCCCCTTTGAGAAGAACTGTGGGCAAGATCACCTCTGTGAAGGGGACCTGAGTGTCAGCCTCAGCTTCTCAGGCCTGCAGACCCTGGTGGTGGGGAGCTCCCTGGAGCTCAATGTGACAGTGACGGTGTGGAATGAGGGTGAGGATTCCTATGGAACTGTGATCAGCTTCTACTATCCAGCAGGGCTGTCCTATCGACGAGTGTTAAGAATCCAGAGGGCACTAAGGTCAGAGCTTCCCCCCAATCTTCATCACTCTTCTCCCTCATCCTGGCCCATTTCCTTCCCTCACTCCACCATGGCCTTCCCTATCCCCAACCCTTCTTTCTTCCTCCCTCAGGGCACCTTCATAGTCACATTTGATGTCTCCTACAAGGCCACCCTGGGAGACAAGTTGCTTTTGAGGGCCAATGCAAGCAGTGAAAATAATAAGCCTACATCCAACAACACTACCTTCCAGCTGGAGCTCCCAGTGAAATATGCTGTCTACACAGTGATCAGCAGGCAGGAAGAATCCACCAAGTACTTCAATTTTTCAGCTTCTGACCAGAAGAGCAGAAAAGAAGCCGAGCATCGATATCGTGTGAATAACCTGAGTCAGCGAGATCTGGCCATCAGTATTCATTTCTGGGTCCCAGTCCTGCTGAACGGTGTGGCTGTGTGGGATGTGGCGATGGTGGCCCCTTCACAGAGTCTCCCCTGTGTGTCAGAGAGGGAACCTCCCCAGCAGCCTGACTTCCAGACCCAGATTCCAAGCAGTCTCGTGCTGGACTGCTCCATTGCTGACTGCCTGAGGTTCCGCTGTGACATCCCCTCCTTCGGCGTCCGGGAGGAACTTGACTTCATTCTGAAGGGCAACCTCAGCTTCGGTTGGGCCAGCCAGACTTTGCAGAAGAAGGCATTGGTCGTGAGTGTGGCTGAAATCATTTTCAACAGATCCGTGTATTCCCAGCTTCCAGGACAGGAGGCATTTTTGAGAGCCCAGGTGGAGATGGTGCTAGAAGAGTATGAGGTCTATAACCCCATCCCCCTCATTGCGAGCAGCTCTGTGGGAGGACTGCTGCTGCTGGCTCTCATCACAGCTACACTGTACAAGTGTGGCTTCTTCAAACGTCAATACAAAGAAATGATGGGTGACAACCCTGAAGACACTGCCACATTCAATGGGGAGTATCTCAGCTGTGAGGCCCCCAATCAGCCTTTGTCCTAA

Related Sequences

bmy_00716T0 SequenceType object (3)

Length: 1078 aa      View alignments
>bmy_00716T0
MRCPGMAFGVVLLLAVLASYHGFNLDVEEPMVFQEDGAGFGQSVTRGGSPPGGGRSQQNRTFVRLPGCHRLVSAHLAEYTPRGREHVLGPVPGGLHRSLLAAGERFWVPGGSRGRNRGQRRLGLGEKEGKCSGGLLAHTGLCPQACGPTMHRACGENMYAKGTCLLLGSHLQIIRTVPATLPECPNQEIDIVFLIDGSGSIVRNDFKRMKNFVRAVMDQFKGTHTLVKAGPPRPGDWDRGGSTSGKANLGGGLASLGAGSVDLCHDEARVQGQGPSSWPSQFSLMQYSNLLKTHFTFSQFQTSRSPQSLVDPIVQLSGLTFTATGIQTVVKELFHSKNGARKTAKKILIVITDGQKYKDPLKYSDVIPQADRANIIRYAIGVGDAFQDPTARQELNIIGSVPSEDHVFKVDNFAALSNIQTQLQEKIFADGPVLGAVGSFSWSGGAFLYPPNRSPTFINMSQEHADMRDSYLADCRLPALPQAPVFRAFTERGSGPHPGWAGGPGRRGPGARAAAQRPILSLSCTRRSLPVLNVEVAVRFTPPEVTKSVYQCWEELPTALEAGDATVCLTIHKSSQDQLGDVRSSVMYDLALDPGRLISRAIFDETKNWTLTRRKTLGLGEHCDTMKLLLPDCVEDVGNPIILRLNXSLVGEPISSSQNLRPVLAVGSQDRFTASLPFEKNCGQDHLCEGDLSVSLSFSGLQTLVVGSSLELNVTVTVWNEGEDSYGTVISFYYPAGLSYRRVLRIQRALRSELPPNLHHSSPSSWPISFPHSTMAFPIPNPSFFLPQGTFIVTFDVSYKATLGDKLLLRANASSENNKPTSNNTTFQLELPVKYAVYTVISRQEESTKYFNFSASDQKSRKEAEHRYRVNNLSQRDLAISIHFWVPVLLNGVAVWDVAMVAPSQSLPCVSEREPPQQPDFQTQIPSSLVLDCSIADCLRFRCDIPSFGVREELDFILKGNLSFGWASQTLQKKALVVSVAEIIFNRSVYSQLPGQEAFLRAQVEMVLEEYEVYNPIPLIASSSVGGLLLLALITATLYKCGFFKRQYKEMMGDNPEDTATFNGEYLSCEAPNQPLS*