Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGAM ENSTTRG00000012346 (Bottlenosed dolphin)

Gene Details

integrin, alpha M (complement component 3 receptor 3 subunit)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011731, Bottlenosed dolphin)

Protein Percentage 75.5%
cDNA percentage 78.16%
Ka/Ks Ratio 0.55965 (Ka = 0.0623, Ks = 0.1114)

BT.35830 ENSBTAG00000047238 (Cow)

Gene Details

integrin alpha-M precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054571, Cow)

Protein Percentage 80.4%
cDNA percentage 85.93%
Ka/Ks Ratio 0.42069 (Ka = 0.1234, Ks = 0.2934)

ITGAM  (Minke Whale)

Gene Details

integrin, alpha M (complement component 3 receptor 3 subunit)

External Links

Gene match (Identifier: BACU011961, Minke Whale)

Protein Percentage 93.84%
cDNA percentage 95.99%
Ka/Ks Ratio 0.65327 (Ka = 0.0364, Ks = 0.0557)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3036 bp    Location:934293..899852   Strand:-
>bmy_00718
ATGCAGTCATCTTCCAAAACAATGCAAGGGGCTTCGGGCAGAGCGTGGCTGGTGGTTGGAGCCCCCCAGGAGATAAAGGCTGCTAACCAGACGGGTGGCCTCTACCAGTGTGACTACAGCATGGGCAAGTGTGAACCCATCCCCCTGCAGGTCCCCCCGGAGGCTGTGAACATGTCCCTGGGCCTGACTCTGGCGTTCGCCACCAACCCTTTCCGGCTGCTGGCCTGTGGCCCCACCGGGCAGCAAATCTGCAAGGAGAACACCTATGCGAACGGCTTCTGCTTCCTGTTTGTATCCAACCTACAGCATCAACCCAGACGGCTCCCAGAGGCCCTGAGAGGGTGCCCTCAGCAAGACAGTGACATTGCTTTTTTGATTGATGGCTCTGGTAGCATCAACCCGACAGACTTTCAGCGGATGAAGAACTTTGTCTCAACTATTTATGGAGAGCTTGCTGGGAGATGGTTAAGGGGGAGGAGGGACACCTTCTCCAGTGTAATACCAGGTGCCCGTTCCCAGTTCTCTYTGATGCAGTACTCTGAAGAATTTCAGACTCATTTCACCTTCAACGACTTCAAGAGAAACCCTTCCCCGGAATTGCTGGTGAAGCCAATAATACAGCTAAGAGAACTGTTTCACAGCAGAAATGGAGCCCGGGAGAATGCCCTTAAGATCCTGGTTGTCATCACAGATGGAGAAAAGTATGGCGATCCTTTGGACTACAAGGATGTCATCCCTGAAGCGGATAGAAAGGGGGTCATTCGCTACGTCATTGGGGTGGGAGATGCCTTCTTCAGTGACAAATCTGTAAAAGAGCTCGATACCATCGCATCCAAGCCGCCTGGTGATCACGTGTTCCAGGTGAATAACTTTGAAGCTCTGAAGACCATTCAGAACCAGCTTCAGGAAAAGATCTTTGCGATTGAGGGTACGCACACAGGAAGTACCAGCTCCTTTGAGTATGAGATGTCTCAGGAAGGCTTCAATAAAGTCACCTTCATCAACACAACCAGGGTAGATTCAGACATGAATGATGCTTACTTGGGTTATGCTGCTGAAGTCATCTTGCAGAACCGGGTGCAAAGCCTGCTTCTGGGGGCACCTCGATATCAGCACATCGGCCTGGTGGTGCTATTCAAAAAGAATGCAGGTGCTTGGGAGAAAAACGCTGATATCAAGGGCAGCCAGATCGGCTCCTACTTCGGGGCCTCCCTCAGCTCCGTGGACGTGGACAGAGATGGCAGCTCCGACCTGGTCCTCATCGGGGCCCCCCATTACTATGAGCAGAGCCGAGGGGGGCAGAGGGCTAAGTGGCAGTGTGGTGCTGTCCTGCGAGGGGAGCAAGGCCACCTCTGGGCCCGCTTTGGGGCAGCTCTGACGGTGCTGGGGGATGTGAACGGGGACAGGCTGACGGACGTGGCCATCGGGGCCCCGGGAGAGCAGGAGAACCGGGGTGCTGTCTACCTGTTTCACGGAACCTCGGGACTGGGCATCAGCCCCGCCCACAGCCAGCGGATCACAGGCTCCCAGTTCTCTCCGAGGCTCCAGTATTTTGGGCAGTCACTGAGCGGGGGCCAGGACCTCACAGCGGATGGACTGGTGGACCTGGCTCCGGTGCTGAAAGTTGAGGCGACCATGGAGTTCACACCCAGGGAAGTGGCAAGGGACGTGTATGAGTGTCGTGAGCGGGTGGTGAAAGGCCGGCTCGCTGGGGAGGTCAGAGTCTGCCTCCGTGTCCGCAAGAACACATGGGACAGGCTGAGAGAAGTGACGTTGGACCTGAGTCAGAAATGTGAGACCCTGAAGCTCCGGTTACTGGATTGTGTAGAGGACTCAGTGACCCCCATTGCCCTGCGCCTCAACTTCTCTCTGGTGGGAAAGCCCTCGTCCTCTTTTGGGAACCTCCGGCCAGTGCTGGCTGTAGATGCTCCGACACTCTTCACAGCCTCGTTTCCCTTTGAGAAGAATTGTGGCAATGACAGCATTTGCCAGGATGACCTCAGCATCACCTTCAGTTTTATGAGCCTGGACACCCTGGTGGTGGGTGGTTCCCGGGACTTAAACGTGACGCTGACTGTGAGAAACCAGGGCGAGGACTCCTACAGAACACAGGTCACCTTCTTCTACCCATCTGGCTTGTCCTATCGGAGGGTGTCAGGCGCCCAGAACCAGCGCTCACAGCGGTCCTGGCGCCTGATCTGTGAGTCTGACGTCTCCACTGAAGGGTCTGGGACCTTGAAGAGCACCAGTTGCAGCATAAACCACCCCATCTTCCCAGACAACTCAGAGAACAACATACCTGGGAACAACAAAACCGAATTCCAGCTGCAGCTGCCTGTGAAGTACGCTGTCTACGTGGTGGTCACCAGCCTTGAGGTCTCGACCAAATATCTCAACTTCACAGCCTCAGAGAAGACCAGCCACATTATAGAGCATCAGTATCAGTTCAACAACCTGGGAGGGAGGAAGCTCCCCATCAGTGTGGTCTTCTTGGTCCCCATCCAGCTGAACCAGGTGACCGTGTGGGACCAGCTCCACTTCACCTTCTCCCAGAACCTCTCCAGTAGATGCCACACCAACAAGAGTGACCCTCATCGCTCTGACTTCCTGGGGGAGCTTAAGAAGACCCCACTGCTGAACTGCTCCATCGCTGTCTGCCAGAGAATCCAGTGTGACATCCCGTCCTTTGGCGTCCAGGAAGAATTCAAGGTCACCCTCAAGGGCAACCTCGCATTTGACTGGTATATCAAGACTTTGCATAACCACCTTCAGGTTGTGAGCACTGCGGAGATCTTGTTTGATGATTCGGAGTTCGCCCTGCTCCCAGGACAGGGCGCGTTTGTGAGGGCCCAGACAGAGACCAAGGTGGAGCCTTACGAAGTACATAACCCTGTCCCGCTGATCGTGGGCAGCTCGGTTGGGGGGCTGGTGCTCCTGGCCCTCGTCACTGCCGGCCTGTACAAGCTTGGCTTCTTCAAACGACAGTACAAGGACATGATAACTGAAGCTGGTCCTGAAACTGCCTCCCCCCAGTAA

Related Sequences

bmy_00718T0 Protein

Length: 1012 aa      View alignments
>bmy_00718T0
MQSSSKTMQGASGRAWLVVGAPQEIKAANQTGGLYQCDYSMGKCEPIPLQVPPEAVNMSLGLTLAFATNPFRLLACGPTGQQICKENTYANGFCFLFVSNLQHQPRRLPEALRGCPQQDSDIAFLIDGSGSINPTDFQRMKNFVSTIYGELAGRWLRGRRDTFSSVIPGARSQFSLMQYSEEFQTHFTFNDFKRNPSPELLVKPIIQLRELFHSRNGARENALKILVVITDGEKYGDPLDYKDVIPEADRKGVIRYVIGVGDAFFSDKSVKELDTIASKPPGDHVFQVNNFEALKTIQNQLQEKIFAIEGTHTGSTSSFEYEMSQEGFNKVTFINTTRVDSDMNDAYLGYAAEVILQNRVQSLLLGAPRYQHIGLVVLFKKNAGAWEKNADIKGSQIGSYFGASLSSVDVDRDGSSDLVLIGAPHYYEQSRGGQRAKWQCGAVLRGEQGHLWARFGAALTVLGDVNGDRLTDVAIGAPGEQENRGAVYLFHGTSGLGISPAHSQRITGSQFSPRLQYFGQSLSGGQDLTADGLVDLAPVLKVEATMEFTPREVARDVYECRERVVKGRLAGEVRVCLRVRKNTWDRLREVTLDLSQKCETLKLRLLDCVEDSVTPIALRLNFSLVGKPSSSFGNLRPVLAVDAPTLFTASFPFEKNCGNDSICQDDLSITFSFMSLDTLVVGGSRDLNVTLTVRNQGEDSYRTQVTFFYPSGLSYRRVSGAQNQRSQRSWRLICESDVSTEGSGTLKSTSCSINHPIFPDNSENNIPGNNKTEFQLQLPVKYAVYVVVTSLEVSTKYLNFTASEKTSHIIEHQYQFNNLGGRKLPISVVFLVPIQLNQVTVWDQLHFTFSQNLSSRCHTNKSDPHRSDFLGELKKTPLLNCSIAVCQRIQCDIPSFGVQEEFKVTLKGNLAFDWYIKTLHNHLQVVSTAEILFDDSEFALLPGQGAFVRAQTETKVEPYEVHNPVPLIVGSSVGGLVLLALVTAGLYKLGFFKRQYKDMITEAGPETASPQ*