Sequence details bmy_00740 (Coding sequence)

Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF40 ENSTTRG00000013139 (Bottlenosed dolphin)

Gene Details

ring finger protein 40, E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012468, Bottlenosed dolphin)

Protein Percentage 98.5%
cDNA percentage 98.03%
Ka/Ks Ratio 0.13991 (Ka = 0.0088, Ks = 0.0628)

RNF40 ENSBTAG00000003421 (Cow)

Gene Details

E3 ubiquitin-protein ligase BRE1B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004443, Cow)

Protein Percentage 96.8%
cDNA percentage 93.21%
Ka/Ks Ratio 0.05386 (Ka = 0.0164, Ks = 0.304)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF40 (Human)   Rnf40 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3111 bp    Location:1323815..1311564   Strand:-
Raw sequence 
>bmy_00740
ATGTCTGGGCCCGGCAACAAACGCGCCGCCGGCGATGGGGGCTCGGGGCCCCCAGAGAAGAAGCTGAGTCGCGAGGAGAAGACCACAACCACGCTTATAGAGCCCATTCGTCTTGGGGGCATCTCTTCCACGGAGGAGATGGACTTGAAGGTTTTGCAGTTCAAGAATAAGAAACTGGCAGAGCGGTTGGAACAGAGACAGGCTTGTGAAGATGAACTCCGAGAACGAATTGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGCCACACTCCTCATTGTCAATCGCTACTGGGCCCAGCTGGATGAAACTGTGGAAGCCCTTCTCCGACACCATGAGAGCCAGGGGGAGCTGTCTTCAGGGACAGAGGCGCCTGGGACCCAGGAGGGGCCAACACGTGATGAGACCCCTCTCACAGAGCCAGGGACATCGGAGCTGAGGGAGCCCCTGCCAATGCAGCTGCGGCCACCTCTCAGTGAGCCAGCCTTGGCTTTTGTGGTGGCCCTGGGTGCGAGCAGTAGTGAGGAGGTGGAGCTGCAGCTGCAGGGCCGCATGGAATTCTCCAAGGCAGCTGTGTCCCGTGTCGTGGAGGCCTCCGACCGCCTACAGCGCCAGGTGGAGGAACTCTGTCAGCGAGTATACAGCCGAGGGGACAGTGAGCCCCCCAGTGAGGCAGCTCGGGCACGCACCCGGGAGCTGGGCCGTGAGAACCGACGACTGCAGGACTTGGCCACCCAGCTACAGGAGAAGCACCACCGCATCTCGTTGGAGTACTCTGAGCTCCAGGATAAAGTGACATCTGCAGAGACCAAAGTGCTGGAGATGGAGACGACAGTAGAAGACCTGCAGTGGGACATTGAGAAGTTGCGGAAGCGTGAGCAAAAGCTCAATAAGCACCTAGCGGAGGCCTTGGAGCAGCTCAACTCTGGCTACTATGTATCTGGGAGCTCCTCAGGCTTTCACGGGGGCCAGATCACACTCAGCATGCAGAAGTTTGAGATGCTGAATGCGGAGTTGGAGGAAAACCAGGAATTGGCCAATAGCCGCATGGCAGAGCTGGAGAAGCTGCAGGCCGAACTTCAGGGGGCTGTGCGGACCAATGAGCGCCTCAAGGTAGCCCTGCGGAGCCTTCCTGAGGAGGTGGTACGGGAGACAGGGGAATATCGAATGCTGCAGGCGCAGTTCTCACTGCTCTACAATGAGTCTCTGCAAGTGAAGACCCAGCTGGACGAGGCCCGTGGGCTGCTGCTGGCCACCAAGAATTCCCACCTGAGGCACATTGAGCACATGGAGAGTGATGAGCTGGGGCTGCAGAAGAAGCTGCGCACAGAGGTTATCCAGCTGGAGGATACGCTGGCCCAGGTACGCAAGGAGTACGAGATGCTGCGCATCGAATCACACACTCTACATAAGGCTTCAGTTGTTATCTTCTTTGTACTGAGAGTGATGGCTCTGGTACTGCCTCTTCCCCCACTGAGGGGTTGGGCCCCTAACCCAGGGACCAGTCCAGCCTTGGTTTCCTGTACTCTTCCAGGGCCCATCAACCGGGAGATGCGCCACCTGATCAGCAGCCTCCAAAACCACAACCACCAGCTAAAGGGGGATGCTCAGCGATACAAGCGGAAGCTGCGGGAAGTGCAGGCTGAGATTGCCAAGCTCCGGGCCCAGGCCAGTGGCTCTACCCACTCCATCCCCACCCTGGGCCACCCAGAGGACTCTGGCCTGAGTGCCCCAGCCCCAGGGAAAGAAGAGGGTGGGCCAGGCCCTGTTGGTGCCCCTGACGCCAGAAAGGAGATGGCTTCAATGCCTGGCGCTGCCATTACTATCTCCTTGGTGAAGAAGGAAGACCTGGTCCCTTCTGAGGAAGAGGCCCAGGCCCTGACCCCCGGGGCCCAGGGCCCCTCCTCCCGGGGCCGAGAACCTGAGGCCAAACCCAAGCGGGAGCTTCGGGAGCGGGAAGGGCCTGGGCTGGGACCCCCATCTGTAGCCTCAGCTCTCTCAAGGACTGATCGGGAGAAAGTCAAGGTGGAGGAGGCCAAGAGGAAGGAGTCAGAGCTCCTCAAAGGTCTACGAGCAGAGCTCAAGAAGGCCCAGGAAAGTCAGAAGGAGATGAAACTGCTGCTGGACATGTATAAGTCTGCACCCAAGGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCAAAGGCTGAGGTCGATGAGCTACGGAGCCGCATCCGGGAATTAGAGGAGAGGGATCGGAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTCGTCAGGCAGAGGAGCAGATAGAACACCTGCAACGCAAGTTGGGTGCCACCAAGCAGGAGGAGGAGGCTCTGCTCTCAGAGATGGATGTGACAGGCCAGGCTTTTGAGGACATGCAGGAGCAGAATGGGCGGCTGCTACAGCAGTTGCGGGAAAAGGATGATGCCAACTTTAAGCTGATGTCAGAGCGGATCAAGGCCAACCAGATTCATAAGCTACTGCGGGAGGAGAAGGATGAGCTGGGCGAGCAGGTTCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCTGCTGACCGTGCAGAAGCTGGAGGAAAAAGAGCGGGCCTTGCAGGGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACACTGCGCAGCCAGGCCCTGGAGCTCAACAAGAGGAAGGCTGTGGAAGCAGCTCAGCTGGCCGAGGACCTGAAGGTGCAGCTGGAGCACGTGCAGACACGGCTGCGAGAGATCCAGCCTTGCCTGGCAGAGAGCCGGGCTGCCCGTGAGAAAGAGAGCTTCAACCTCAAGAGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAGCTGGAGAAGCAGAGGAAGGTGGAGGTTTACGCAGATGCTGATGAAATCCTCCAGGAGGAGATCAAGGAGTACAAGGCGCGGCTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTCACCAAGTGCTTCCACGTTTTCTGCTTCGAGTGTGTACGGGGCCGCTATGAGGCCCGCCAGAGGAAGTGCCCCAAGTGCAACGCAGCCTTTGGTGCCCATGACTTCCACCGTGTCTACATCAGCTGA

Related Sequences

bmy_00740T0 Protein

Length: 1037 aa      View alignments
>bmy_00740T0
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRHHESQGELSSGTEAPGTQEGPTRDETPLTEPGTSELREPLPMQLRPPLSEPALAFVVALGASSSEEVELQLQGRMEFSKAAVSRVVEASDRLQRQVEELCQRVYSRGDSEPPSEAARARTRELGRENRRLQDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHLAEALEQLNSGYYVSGSSSGFHGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAELQGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIESHTLHKASVVIFFVLRVMALVLPLPPLRGWAPNPGTSPALVSCTLPGPINREMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIAKLRAQASGSTHSIPTLGHPEDSGLSAPAPGKEEGGPGPVGAPDARKEMASMPGAAITISLVKKEDLVPSEEEAQALTPGAQGPSSRGREPEAKPKRELREREGPGLGPPSVASALSRTDREKVKVEEAKRKESELLKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS*