Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000005880 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005576, Bottlenosed dolphin)

Protein Percentage 99.08%
cDNA percentage 98.74%
Ka/Ks Ratio 0.12955 (Ka = 0.005, Ks = 0.0388)

EIF3C ENSBTAG00000006543 (Cow)

Gene Details

Eukaryotic translation initiation factor 3 subunit C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023384, Cow)

Protein Percentage 98.05%
cDNA percentage 95.3%
Ka/Ks Ratio 0.0443 (Ka = 0.0091, Ks = 0.2052)

EIF3C  (Minke Whale)

Gene Details

eukaryotic translation initiation factor 3, subunit C

External Links

Gene match (Identifier: BACU011901, Minke Whale)

Protein Percentage 99.54%
cDNA percentage 99.16%
Ka/Ks Ratio 0.08413 (Ka = 0.0021, Ks = 0.025)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3030 bp    Location:2106704..2131160   Strand:+
>bmy_00793
ATGTCGAGACCGCCTCCTCGCGGCCAAGTTTACTGCAGGCCTGACCCTGCCCCCTGCGAGGCGCGAGGGCCACTGGGAGTTGTAGTCTCACAGTATAGTTCGTCGGCGTCTCCCGGAAGTGACGCAAAGGTCCCGCCTTCTCCTCGCCGCGTTTCCGCTGCTTCGGTTAAGTGGTGTGATTCGGGAGGTCAGCAGGTCTGGCCGCGCCCGCCGCAGCCGCTCAGCGCCGTCGCCATGTCGCGGTTTTTTACCACCGGTTCGGACAGCGAGTCCGAGTCGTCCCTGTCCGGGGAGGAGCTCGTCACCAAACCTGTCGGGGGTAACTACGGCAAACAGCCATTGTTGCTGAGTGAGGATGAAGAAGATACCAAGAGAGTTGTCCGAAGCGCCAAGGATAAGAGGTTTGAGGAACTGACCAACCTTATCCGGACCATCCGTAATGCCATGAAGATTCGGGATGTCACCAAGTGCCTGGAAGAGTTTGAGCTCCTGGGAAAAGCATATGGGAAGGCTAAGAGCATTGTGGACAAGGAAGGTGTCCCCCGGTTCTATATCCGAATCCTGGCTGACCTGGAGGACTACCTTAATGAGCTATGGGAAGATAAGGAAGGAAAGAAGAAGATGAACAAGAATAATGCCAAGGCCCTGAGCACCCTGCGCCAGAAGATCCGAAAATACAACCGAGATTTTGAGTCCCATATTACAAATTACAAGCAGAACCCTGAGCAGTCTGCAGATGAAGATGCTGAGAAGAATGAGGAGGATTCAGAAGGCTCTTCAGATGAGGATGAGGATGATGAAGGAGTCAGTGCTGCAGCTTTCCTAAAGAAGAAATCAGAAGCTCCTTCTGGGGAGAGTCGGAAGTTCTTCAAAAAGATGGAGGATGAAGATGAGGACTCAGAAGATTCAGAAGATGATGAAGATTGGGACACAGGTTCCACATCTTCTGATTCAGATTCAGAGGAGGAAGAAGGGAAACAGACAGTGCTGGCGTCAAGATTCCTTAAAAAAATTTATATTAATAATTTTCATAAGAGGGGAAAGAAAGGCAGGGAAAAGCAGCCAGTCATTCTTGTAGAGTGTAACTTGGACCCAGGAAGAGAAAAAGAGGAATTTCGTGGGAGGAAGAAGCCTCAAGGTGGAGAGGGGGCTGATCCTTCATCTTCTCCTGTGTCTCTTGGCAGGGCCCCCACCACAGAGGAGGACAAGAAGGCAGCTGAGAAGAAACGGGAGGACAAAGCCAAGAAGAAGCACGATAGGAAATCCAAGCGCCTGGATGAGGAGGAGGAAGACAATGAAGGCGGGGAGTGGGAAAGGGTCCGGGGTGGAGTGCCCCTGGTTAAGGAGAAGCCAAAAATGTTTGCCAAGGGAACTGAGATCACCCACGCTGTTGTCATCAAGAAACTGAATGAGATCCTACAGGCACGAGGCAAGAAGGGAACTGATCGTGCAGCCCAGATTGAGCTGCTACAGCTGCTGGTTCAGATTGCCTCTGAAAACAACCTGGGAGAGGGTGTCACCGTCAAGATCAAGTTCAATATCATCGCCTCTCTTTATGACTACAACCCCAACCTGGCCACATACATGAAGCCTGAGATGTGGCAGAAGTGTCTGGACTGCATCAATGAGCTGATGGACATCCTGTTTGCAAACCCCAACATCTTTGTTGGAGAGAACATTCTGGAAGAGAGTGAGAACCTGCATAACGCTGACCAGCCGCTGCGTGTCCGTGGCTGTATCCTAACTCTGGTGGAACGAATGGATGAAGAATTTACCAAGATAATGCAAAACACTGATCCTCACTCCCAAGAGTACGTGGARCACCTGAAGGATGAGGCACAGGTGTGCACCATCATTGATCGTGTGCAGCGCTACCTGGAGGAGAAGGGCACCACTGACGAGATCTGTCGCATCTACTTGAGGCGCATCCTCCACACCTACTACAAGTTTGATTACAAGGCCCATCAGCGGCAGCTTACCCCCCCTGAGGGCTCCTCAAAGTCAGAGCAAGACCAGGCCGAAAATGAGGGCGAGGACTCAGCTGTGCTGATGGAGAGACTGTGCAAGTACATCTATGCCAAGGACCGCACAGACCGAATCCGCACATGCGCCATCCTCTGCCATATCTACCATCATGCTCTGCACTCCCGCTGGTACCAGGCCCGTGACCTCATGCTCATGAGCCACCTACAAGACAACATTCAGCACGCGGACCCGCCAGTACAGGGCCTGACCAAGGATGCTCACAATGCCCTGCTGGACATCCAGTCAAGCGGCCGGGCCAAGGAGCTTCTGGGCCAGGGTCTGCTGCTGCGCAGCCTGCAAGAGCGCAACCAGGAGCAGGAGAAGGTGGAGCGGCGCCGGCAGGTGCCCTTCCACCTGCACATAAATCTGGAGCTGCTGGAGTGTGTTTACCTGGTGTCGGCCATGCTCCTGGAGATCCCCTACATGGCCGCCCATGAGAGTGACGCCCGCCGACGCATGATCAGCAAGCAGTTCCATCACCAGCTGCGGGCCATGAAGATGGGTGACTGGAAGACCTGCCACAGTTTTATCATCAACGAGAAGATGAATGGCAAAGTGTGGGACCTTTTCCCGGAGGCTGACAAAGTCCGATCCATGCTGGTTAGGAAGATCCAGGAAGAGTCACTGCGGACCTACCTCTTCACCTACAGCAGTGTCTATGACTCCATCAGCATGGAGACACTGTCTGACATGTTTGAACTGGACCTGCCCACTGTGCACTCCATCATCAGCAAGATGATCATTAACGAGGAGTTGATGGCCTCCCTGGACCAGCCGACACAGACAGTGGTGATGCACCGCACTGAGCCCACTGCCCAGCAGAACCTGGCCCTGCAGCTGGCTGAGAAGCTGGGCAGCCTGGTGGAAAACAATGAGCGGGTGTTTGACCACAAGCAGGGTACCTATGGTGGCTACTTCCGAGACCAGAAGGATGGCTACCGCAAAAATGAGGGCTACATGCGCCGGGGTGGCTACCGCCAGCAGCAGTCTCAGACGGCCTACTGA

Related Sequences

bmy_00793T0 Protein

Length: 1010 aa      View alignments
>bmy_00793T0
MSRPPPRGQVYCRPDPAPCEARGPLGVVVSQYSSSASPGSDAKVPPSPRRVSAASVKWCDSGGQQVWPRPPQPLSAVAMSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEELTNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITNYKQNPEQSADEDAEKNEEDSEGSSDEDEDDEGVSAAAFLKKKSEAPSGESRKFFKKMEDEDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTVLASRFLKKIYINNFHKRGKKGREKQPVILVECNLDPGREKEEFRGRKKPQGGEGADPSSSPVSLGRAPTTEEDKKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITHAVVIKKLNEILQARGKKGTDRAAQIELLQLLVQIASENNLGEGVTVKIKFNIIASLYDYNPNLATYMKPEMWQKCLDCINELMDILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQVCTIIDRVQRYLEEKGTTDEICRIYLRRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAENEGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPPVQGLTKDAHNALLDIQSSGRAKELLGQGLLLRSLQERNQEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLRAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRSMLVRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFRDQKDGYRKNEGYMRRGGYRQQQSQTAY*