Sequence detailsbmy_00794 (Coding sequence)

Part of scaffold_13 (SequenceType object (1))

For more information consult the page for scaffold_13 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATXN2LENSTTRG00000005913 (Bottlenosed dolphin)

Gene Details

ataxin 2-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005599, Bottlenosed dolphin)

Protein Percentage 95.47%
cDNA percentage 94.99%
Ka/Ks Ratio 0.07009 (Ka = 0.0016, Ks = 0.0222)

ATXN2LENSBTAG00000032087 (Cow)

Gene Details

ataxin-2-like protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042875, Cow)

Protein Percentage 97.11%
cDNA percentage 94.51%
Ka/Ks Ratio 0.10007 (Ka = 0.0165, Ks = 0.1646)

ATXN2L (Minke Whale)

Gene Details

ataxin 2-like

External Links

Gene match (Identifier: BACU011900, Minke Whale)

Protein Percentage 97.79%
cDNA percentage 98.21%
Ka/Ks Ratio 0.63344 (Ka = 0.0157, Ks = 0.0249)

Additional orthologs identified in other species via the OPTIC pipeline.

ATXN2L (Human)   Atxn2l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3249 bp    Location:2156169..2167326   Strand:+
Raw sequence 
>bmy_00794
CCCCGGTGCGCGCGGACAGCTCGCGCCCCAGCTTCCCAGTCCCCGTCGTTTCCCGCGCACTCCGGCGGGGGCCCAGCCCCGGCTTCCTCTCTCCCTCCCTTCCCCCTAATTCCCCTTCCGGACGCTGCCATCATGTTGAAGCCTCAGCCGCCACAACAGACCTCCCAGCCCCAGCAGCCGCCCCCCACGCAACAGGCCGTGGCACGCCGGCCTCCCGGGGGCACCAGCCCTCCCAACGGCGGCCTCCCGGGGCCCCTGGCCTCCACCTCGGCTCCCCCAGGGCCTCCCGCCGCTGCTTCCCCCTGCTTGGGGCCTGCAGCCGCTGCCGGGAGCGGGCTCCGCCGGGGAGCTGAGGGCATCTTGGCGCCGCCGCCGCCGCAGCAGCAACATCAGGAGAGGCCAGGGGCAGCGGCCATCGGCAGCGCCAGGGGACAAAGCACAGGAAAGGGACCCCCACAGTCACCGGTGTTTGAGGGTGTCTACAACAATTCCAGAATGCTGCATTTCCTTACAGCTGTTGTGGGCTCCACTTGTGATGTAAAGGTAAAGAATGGTACCACCTATGAAGGTATCTTCAAGACGCTGAGCTCAAAGTTTGAACTGGCAGTAGACGCTGTGCACCGGAAAGCATCGGAGCCAGCAGGTGGCCCTCGTCGGGAAGACATTGTGGACACCATGGTGTTTAAACCAAGTGATGTCATGCTTGTTCACTTCCGAAATGTTGACTTCAATTATGCTACTAAAGACAAGTTCACTGATTCAGCCATTGCCATGAACTCGAAGGTGAATGGGGAGCACAAAGAGAAGGTGCTTCAGCGCTGGGAGGGGGGCGACAGCAACAGCGATGACTACGACCTGGAGTCTGACATGTCCAATGGATGGGACCCCAATGAAATGTTCAAGTTCAATGAGGAGAACTATGGCATAAAGACTACTTATGACAGCAGTCTCTCTTCTTACACGGTGCCCTTAGAGAAGGACAACTCAGAAGAATTTCGTCAGCGGGAGCTGCGTGCAGCCCAGTTGGCTCGAGAGATTGAATCGAGCCCCCAGTACCGCCTGCGGATCGCCATGGAGAACGATGATGGGCGCACCGAGGAGGAGAAGCACAGTGCAGTTCAGCGACAGGGTTCAGGGCGAGAGAGCCCCAGCTTGGCATCTAGGGAGGGAAAGTATATCCCTCTACCCCAACGAGTTCGGGAAGGTCCCCGGGGAGGAGTTCGATGCAGTAGTTCTCGGGGTGGCCGGCCTGGCCTTAGCTCTTTGCCACCTCGTGGCCCTCACCATCTTGACAATAGCAGCCCTGGCCCAGGTTCTGAGACACGCGGTATCAATGGAGGCCCTTCCCGCATGTCCCCTAAGGCACAGCGGCCTCTGAGAGGTGCCAAGACTCTGTCTTCCCCCAGCAGCAGGCCTTCTGGAGAAGCTTCTGTTCCACCTCCTCCTGCAGTAGGCCGGATGTACCCCCCACGCTCTCCCAAGTCAGCTGCCCCTGCCCCAATCTCAGCTTCCTGTCCTGAGCCTCCCATCGGCTCAGCAGTACCGACCTCTTCAGCTTCCATCCCCGTGACATCATCAGTTGGGGATCCTGGAGTAGGCTCCATTTCCCCAGCTTCTCCAAAGATCTCACTGGCACCCACAGATGTAAAAGAACTCCCAGCCAAGGAACCTGGGAGAACGCTGGAGTCCCAGGAGCTGTCCCGGATAGCAGGGAAAGTCCCTGGCCTTCAGAACGAGCAGAAACGCTTTCAACTGGAAGAACTGAGAAAATTTGGGGCCCAGTTTAAGCTTCAGCCCAGTAGCTCCCCTGAGACCAGCCTGGATCCTTTTCCTCCCCGGATCCTAAAGGAGGAGGCCAAAGGGAAGGAGAAGGAGGTTGATAGTCTTTTGGCTTCAGAGCCCATGGGGTCCCCTGTTTCCTCCAAGACAGAATCCATATCGGATAAGGAGGACAAACCACCCCTGCCACCAGCAGGAGGCACCGAAGGGCCGGATCAGCCCCCACCGCCTTGCCCAAGCCAAACCAGTAGCCCCCCAGTGGGCCTCATCAAGGGAGATGACAAGGATGAGGGCCCTGTTGCTGAACAAGTGAAGAAGTCAACATTGAACCCTAATGCCAAGGAGTTCAATCCCACTAAGCCCCTGCTGTCTGTGAATAAATCCACCAGTACTCCAACTTCTCCTGGGCCCCGGACTCATTCAACTCCCTCCATCCCGGTGCTGACAGCAGGCCAGAGTGGGCTATATAGCCCCCAGTACATTTCCTACATACCTCAGATCCACATGGGACCAGCTGTTCAGGCACCTCAGATGTATCCATATCCTGTGTCCAACTCAGTGCCTGGACAGCAGGGCAAGTACCGGGGAGCAAAAGGCTCCCTGCCCCCCCAGCGCTCGGACCAACACCAGCCAGCCTCAGCCCCTCCGATGATGCAGGCCGCCGCCGCTGCTGGCCCCCCTCTGGTGGCTGCCACACCTTATTCTTCCTACATCCCCTACAATCCACAGCAGTTCCCAGGCCAGCCCGCCATGATGCAGCCCATGGCCCACTACCCCTCGCAGCCGGTGTTTGCCCCCATGCTTCAGAGCAACCCACGCATGCTGACGTCGGGGAGCCATCCCCAGGCCATTGTGTCATCCTCCACCCCTCAGTACCCTTCTGCAGAGCAGCCCACCCCCCAAGCCCTTTATGCCACTGTTCACCAGTCCTATCCACACCATGCCACGCAGCTCCATGCCCACCAGCCGCAGCCGGCCACCACACCTACTGGGAGCCAGCCGCAGTCCCAGCATGCAGCCCCCAGTCCCGTCCAGCACCAGGCGGGGCAGGCCCCACACCTGGGCAGTGGACAGCCACAGCAGAACCTGTACCACCCAGGGGCCCTGACAGGCACGCCGCCTTCTCTGCCGCCGGGACCTTCTGCGCAGTCCCCTCAGAGCAGCTTCCCCCAGCCAGCCGCTGTGTATGCTATCCATGCCCACCAGCAGCTGCCCCACGGCTTCACCAACATGGCCCATGTTACCCAGGCCCATGTCCAAACTGGAATCACAGCAGCCCCGCCCCCTCACCCTGGGGCTCCCCACCCGCCCCAGGTGATGCTGCTGCACCCACCCCAGAGCCATGGGGGCCCCCCCCAAGGCGCGGTGCCCCAGAGTGGGGTGCCTGCACTCTCAGCTTCCACACCCTCACCCTATCCCTACATCGGACACCCCCAAGCTCTCAGTGACCCCGACTGTCTCCTGACTTAG

Related Sequences

bmy_00794T0 SequenceType object (3)

Length: 1083 aa      View alignments
>bmy_00794T0
PRCARTARAPASQSPSFPAHSGGGPAPASSLPPFPLIPLPDAAIMLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLGPAAAAGSGLRRGAEGILAPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYGIKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSETRGINGGPSRMSPKAQRPLRGAKTLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVGDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDSLLASEPMGSPVSSKTESISDKEDKPPLPPAGGTEGPDQPPPPCPSQTSSPPVGLIKGDDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQALSDPDCLLT*