Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP2A1 ENSTTRG00000007913 (Bottlenosed dolphin)

Gene Details

ATPase, Ca++ transporting, cardiac muscle, fast twitch 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007489, Bottlenosed dolphin)

Protein Percentage 88.42%
cDNA percentage 91.13%
Ka/Ks Ratio 0.36474 (Ka = 0.0525, Ks = 0.1439)

BT.62768 ENSBTAG00000006541 (Cow)

Gene Details

sarcoplasmic/endoplasmic reticulum calcium ATPase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008593, Cow)

Protein Percentage 88.32%
cDNA percentage 89.07%
Ka/Ks Ratio 0.16772 (Ka = 0.0659, Ks = 0.393)

ATP2A1  (Minke Whale)

Gene Details

ATPase, Ca++ transporting, cardiac muscle, fast twitch 1

External Links

Gene match (Identifier: BACU011897, Minke Whale)

Protein Percentage 93.33%
cDNA percentage 94.72%
Ka/Ks Ratio 0.4094 (Ka = 0.044, Ks = 0.1076)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2358 bp    Location:2195065..2211671   Strand:+
>bmy_00797
ATGGCAAAGAAGAACGCAATTGTGAGGAGCTTGCCCTCCGTGGAGACGCTGGGCTGCACCTCTGTCATCTGTTCCGACAAGACAGGCACCCTCACCACGAACCAGATGTCTGTCTGCAAGATGTTCATCATCGACAAGGTGGACGGGGACATCTGCCTTCTGAACAAGTTCTCTATCACTGGCTCCACTTATGCTCCAGAAGGAGAGGTCTTGAAGAATGATAAGCCAGTCCGGACAGGGGAGTATGATGGGCTGGTGGAGCTAGCCACCATTTGTGCCCTCTGCAATGACTCCTCCTTGGACTTCAATGAGGCCAAAGGTGTTTATGAGAAGGTGGGCGAGGCCACCGAGACGGCACTCACCACCCTGGTGGAGAAGATGAATGTATTCAACACTGAACTGAGAAACCTCTCAAAGGTGGAGAGGGCCAACGCCTGCAACTTGGTGATCCGCCAGCTAATGAAGAAAGAATTCACCCTGGAGTTCTCCCGGGACAGAAAGTCCATGTCTGTCTATTGCTCTCCAATGAAATCCCGGGCTGCTGTGGGCAACAAAATGTTTGTCAAGGGTGCCCCGGAGGGGATCATCGAACGCTGTAACTACCTGCGAGTCGGCACCACTCGGGTGCCCATGACAGGGCCGGTGAAGGAGACGATTCTGTCGGTAATCAAGGAGTGGAGCGGTGGCCGGGACACCCTGCGCTGCCTGGCCCTGGCCACCCGGGACACACCCCCAAAGCGAGAGGAGATGGTCCTGGATGACGCTTCCAGGTTCATGGAGTACGAGACGGACCTGACGTTCGTTGGCGTGGTGGGCATGCTGGACCCGCCCCGCAAGGAGGTCACAGGCTCTATCCTCCTGTGCCGTGATGCTGGCATCCGAGTGATCATGATCACTGGGGACAACAAGGGCACAGCCATTGCCATCTGCCGACGAATTGGCATCTTCGAGGAGAACGAGGATGTGGCCGACCGAGCCTACACTGGCCGGGAGTTTGATGACCTGCCCCCGGCCGTGCAGCGGGAGGCCTGCAGACGCGCCTGCTGCTTTGCCCGCGTGGAGCCCTCCCACAAGTCGAAGATCGTGGAGTGTCTGCAGTCCTTCGATGAGATCACAGCGATGACAGGTGATGGCGTCAATGACGCCCCTGCCCTGAAGAAGGCGGAGATCGGCATTGCCATGGGATCCGGCACCGCCGTGGCCAAGACGGCCTCCGAGATGGTACTGGCCGACGACAACTTCTCCACCATCGTGGCTGCCGTGGAGGAGGGCCGCGCCATCTACAACAACATGAAGCAGTTCATCCGCTACCTCATCTCCTCCAATGTGGGAGAGGTGGTCTGCATCTTCCTGACAGCTGCCCTGGGGCTGCCTGAGGCCCTGATCCCCGTGCAGCTGCTGTGGGTGAACCTGGTGACAGACGGGCTCCCGGCCACAGCCCTGGGCTTCAACCCCCCAGACCTGGACATCATGGACCGGCCCCCCCGGAGCCCCAAGGAGCCACTCATCAGTGGCTGGCTCTTCTTCCGCTACATGGCAATTGGGGGTGAGCAGGATGAGACCCCACACTTCTTCCCGACCCTCAGGGCTGATCCCCTCTCTGGGACACCAGCTTCCCCACAGCAGCCACTGCGGTGGGCCCTCTTCCTCCAGCAGCTGTTCATGGCCAGGAGGCCCTCTCAACTCCTCCCGTCTCCCCAGCCCTGGGCCCCCAACTCCCATCTTCTCTCCACCACAGCCTACGTGGGTGCAGCCACGGTGGGAGCAGCAGTCTGGTGGTTCCTGTACGCTGAGGACGGGCCTCATATCACCTACAGCCAGCTGACTCACTTCCTGAAGTGTACGGAGCACAACCCTGACTTTGAGGGTGTGGATTGTGAGGTCTTCGAGGCCCCCGAGCCCATGACCATGGCCTTGTCCGTGCTGGTTACCATCGAGATGTGCAATGCTCTCAACAGCCTGTCTGAGAACCAGTCCCTCCTGCGGATGCCGCCCTGGGCGAACATCTGGCTGCTGGGCTCCATCTGCCTCTCCATGTCCCTCCACTTCCTCATCCTCTACGTGGACCCTCTGCCGATCCAGAAGATGAAAGAAGGAAGTAACCAGTCCTTTTGCCCTCCCTTCCCCACCCTGATAGTGACGCGTCTTCAGCCAGAGCTGTGGCACAGGCCTCCACCACGTGCCCCCCAGCCCGACATTCTTGTTTATAAACGTAATGTCCCCTTCACGTCTCCTCCCCCCTCAGCAACTGCCCCCCCCCCTTTTGCCCTTGTAAAACCTCCCCTCCCTGACCCCGTGGGGCTTGCAGGGACAAGGCGACCGATTGAGCTGAGCTGCTTATTTATTGAAAATAAATGA

Related Sequences

bmy_00797T0 Protein

Length: 786 aa      View alignments
>bmy_00797T0
MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDICLLNKFSITGSTYAPEGEVLKNDKPVRTGEYDGLVELATICALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTELRNLSKVERANACNLVIRQLMKKEFTLEFSRDRKSMSVYCSPMKSRAAVGNKMFVKGAPEGIIERCNYLRVGTTRVPMTGPVKETILSVIKEWSGGRDTLRCLALATRDTPPKREEMVLDDASRFMEYETDLTFVGVVGMLDPPRKEVTGSILLCRDAGIRVIMITGDNKGTAIAICRRIGIFEENEDVADRAYTGREFDDLPPAVQREACRRACCFARVEPSHKSKIVECLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGEQDETPHFFPTLRADPLSGTPASPQQPLRWALFLQQLFMARRPSQLLPSPQPWAPNSHLLSTTAYVGAATVGAAVWWFLYAEDGPHITYSQLTHFLKCTEHNPDFEGVDCEVFEAPEPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWANIWLLGSICLSMSLHFLILYVDPLPIQKMKEGSNQSFCPPFPTLIVTRLQPELWHRPPPRAPQPDILVYKRNVPFTSPPPSATAPPPFALVKPPLPDPVGLAGTRRPIELSCLFIENK*