Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RABEP2 ENSTTRG00000007916 (Bottlenosed dolphin)

Gene Details

rabaptin, RAB GTPase binding effector protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007490, Bottlenosed dolphin)

Protein Percentage 97.69%
cDNA percentage 98.11%
Ka/Ks Ratio 0.14283 (Ka = 0.0096, Ks = 0.0672)

RABEP2 ENSBTAG00000006542 (Cow)

Gene Details

Rab GTPase-binding effector protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008595, Cow)

Protein Percentage 94.32%
cDNA percentage 93.94%
Ka/Ks Ratio 0.08515 (Ka = 0.0248, Ks = 0.2914)

RABEP2  (Minke Whale)

Gene Details

rabaptin, RAB GTPase binding effector protein 2

External Links

Gene match (Identifier: BACU011896, Minke Whale)

Protein Percentage 99.43%
cDNA percentage 99.18%
Ka/Ks Ratio 0.0708 (Ka = 0.0024, Ks = 0.0339)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1653 bp    Location:2222836..2211276   Strand:-
>bmy_00799
ATGGCGGCACCTGCGCGCCCGGCCGCGGGCGAGGATGGCCGGCGGCGGCAGCCGGAGGCCGCGCTGGACCCCCAGCCCCCGGAGGGGGCAAAAGTTGAGGCCGAGTCAGCGGAGCTCGACCGGCTTCGGGCTGAGCTGGCAGGCGCCCTGGCAGAAATGGAAACCATGAAGGCTGTGGCCGAGGTGAGCGAGAGCACGAAGGCCGAGGCTGTGGCTGCAGTGCAGCGGCAATGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGACTCCATCAGCAGCTATGAAGCCCAGATCGCGTCTCTGAAGCAGGAGCGGCAGCAGCAGCAGCAGGACCGTGAGGAGAAGGAGCGGGAGCTGGGGCGCTTGAAGCAGCTGCTGTCCAGGGCTCACCCCCTGGACTCCTTGGAGAAGCAGATGGAAAAGGTTGGGGTTGGGACAGCCTACCCGCCCCCTCCTCAGGGATTTGGAAACATGTTGAAGCAGCCAAAGGCCCACGAGGACTCGGAGAAGCTGCGGGAGATCGTGTTGCCCATGGAGCAGGAGATTGAGGAGCTGAAGGCGAAATTGCTGAGGGCAGAGGAGCTGATCCAAGAGATCCAGAGACGTCCCCGGCATCCCCCTTCCCTGCACGGCTCCACGGAGTTGCTCCTGTCCCGGGACCCATCTCCCCCACTGGAGCCTCTCGAGGAGCTGAGTGGAGATGGGGGCGCGGCGGCCGAGGCCTTCGCCCACAACTGTGATGACAGCGCCTCCATCTCCTCCTTCTCCCTCGGCGGTGGGGCCAGCGGCAGCGCCTCACTGCCCCGCAGCCGCCATGGCCTGAGCCCCGAGCAGGAGGAGACAGCCTCTCTGGTGTCCACGGGCACCCTGGTCCCTGAGGGCATCTACCTGCCCCCTCCTGGTTACCAGCTCGTCCCAGACAACCAGTGGGAGCAGCTGCAGCTGCAGAAGGACCTGGAGAGCATCAGCCGGGAGCGGGACGAGCTGCAAGAGGGCCTGAGACGGAGCAACGAGGACTGCGCCAAGCAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAGGGGACCGTGAGCCAGGCCCAGGAGCGGGTTCAGCTGCAGATGGAGCTGCGGCAGCTGGTGCGCCGCACGCAGCAGGAGGCGCGGGCCCACCAGCAGGCCCAGGAGCACGAGGCCGAGCGGCTGCGGATTGAGATCGTGACCCTGCGGGAGGCACTGGAGGAAGAGACGGCGGCGAGGGCCAGCCTGGAGGGGCAGCTGAGGGTGCAGCGGGAGGAGACAGAGGTGTTAGAGGCCTCCCTGTGCAGCCTGAGGATGGAGATGGAGCGGGTCCAGCAGGAGCAGAGCAAGGCCAGGCAGCAGGAAGTCCTGAGGCAGCCACCGGGCTCGGGCCGCACAGAAGAGGCCCAGCTCACAGACCTCCTCTTGGAACAGAGGGCAAAGATGCTGCGGCTGCAGGCTGAGCTGGAGACCAGTGAGCAAGTGCAGAGGGATTTCGTACGACTGTCCCAGGCCTTGCAGGTGCGCCTGGAACGGATCCGCCAGGCAGAGAGTCTGGAGCAAGTGCGCAGCATCATGGACGAGGCGCCCCTCAGGGACGTCAGGGACATCAAGGACACCTGA

Related Sequences

bmy_00799T0 Protein

Length: 551 aa      View alignments
>bmy_00799T0
MAAPARPAAGEDGRRRQPEAALDPQPPEGAKVEAESAELDRLRAELAGALAEMETMKAVAEVSESTKAEAVAAVQRQCQEEVASLQAILKDSISSYEAQIASLKQERQQQQQDREEKERELGRLKQLLSRAHPLDSLEKQMEKVGVGTAYPPPPQGFGNMLKQPKAHEDSEKLREIVLPMEQEIEELKAKLLRAEELIQEIQRRPRHPPSLHGSTELLLSRDPSPPLEPLEELSGDGGAAAEAFAHNCDDSASISSFSLGGGASGSASLPRSRHGLSPEQEETASLVSTGTLVPEGIYLPPPGYQLVPDNQWEQLQLQKDLESISRERDELQEGLRRSNEDCAKQMQVLLAQVQNSEQLLRTLQGTVSQAQERVQLQMELRQLVRRTQQEARAHQQAQEHEAERLRIEIVTLREALEEETAARASLEGQLRVQREETEVLEASLCSLRMEMERVQQEQSKARQQEVLRQPPGSGRTEEAQLTDLLLEQRAKMLRLQAELETSEQVQRDFVRLSQALQVRLERIRQAESLEQVRSIMDEAPLRDVRDIKDT*