Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPNS1 ENSTTRG00000007920 (Bottlenosed dolphin)

Gene Details

spinster homolog 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007494, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 97.76%
Ka/Ks Ratio 0.10737 (Ka = 0.0076, Ks = 0.0707)

SPNS1 ENSBTAG00000014653 (Cow)

Gene Details

Protein spinster homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019510, Cow)

Protein Percentage 95.17%
cDNA percentage 93.7%
Ka/Ks Ratio 0.10035 (Ka = 0.0224, Ks = 0.2235)

SPNS1  (Minke Whale)

Gene Details

spinster homolog 1 (Drosophila)

External Links

Gene match (Identifier: BACU011893, Minke Whale)

Protein Percentage 98.87%
cDNA percentage 98.65%
Ka/Ks Ratio 0.13357 (Ka = 0.0051, Ks = 0.0384)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location:2258407..2266799   Strand:+
>bmy_00802
ATGTCCGGGTCCGACACCGCGCCCTTCCTCAGCCAGGCGGATGACACGGACGACGGGCCTGCGCCCGGCAACCCGGGGTTGCCGGAGTCCATGGGGAACCCGAAGTCCGAGGATCCCGAAGTCCCAGACCGGGAGGGATTGCAGCGCATCACGGGCTTGTCTTCGGGCCGTTCGGCTCTCATAGTGGCCGTGCTGTGCTACATCAACCTCCTTAACTACATGGACCGCTTCACCGTGGCTGGCGTCCTTCCGGACATTGAGCAGTTCTTCGACATCGGAGACAGTAGCTCCGGCCTTATCCAGACCGTGTTCATCTCCAGTTACATGGTGTTGGCACCTGTGTTTGGCTACCTGGGTGACAGGTACAATCGGAAGTATCTCATGTGTGGGGGCATTGCCTTCTGGTCCCTGGTGACACTGGGGTCGTCCTTCATCCCCAGAGAGCGATTCTGGCTGCTCCTCCTGACCCGGGGCCTGGTGGGGGTCGGGGAGGCCAGTTACTCCACCATCGCACCCACCCTCATCGCTGACCTCTTCGTGGCAGACCAGCGGAGTCGGATGCTCAGTGTGTTCTACTTTGCCATCCCTGTGGGCAGTGGTCTGGGTTACATTGCAGGCTCCAAAGTGAAGGATGCGGCCGGCGACTGGCACTGGGCTCTGCGGGTGACACCAGGTCTAGGAGTGGTGGCTGTTGTGCTGCTGTTCCTGGTAGTACGGGAGCCGCCAAGGGGAGCTGTGGAGCGCCACTCAGACTCACCACCCCTGAACCCCACCTCGTGGTGGGCAGATCTGAGGGCTCTGGCAAGAAACCTCATCTTTGGGCTCATCACCTGCCTCACCGGGGTCCTGGGTGTGGGCCTGGGCGTGGAGATCAGCCACCGGCTCCGCCGCTCCAACCCCCGGGCTGACCCGCTGGTTTGTGCTGCTGGCCTCCTGGGCTCTTCACCCTTCCTCTTCCTGTCCCTCGCCTGCGCCCGTGGTAGCATCGTGGCCACCTATATTTTCATTTTTATTGGAGAGACACTGCTGTCCATGAACTGGGCCATTGTGGCTGACATTCTGCTGTACGTGGTGATCCCCACACGACGCTCCACCGCTGAAGCCTTTCAGATCGTGCTGTCCCACCTGCTGGGTGACGCTGGGAGCCCTTACCTGATTGGCTTGATCTCCGACCGCCTCCGCCAGGGCTGGCCCCCCTCCTTCTTGTCTGAGTTCCGGGCCCTGCAGTTCTCGCTCATGCTCTGCGCCTTCATGGGSGCGCTGGGCGGCGCGGCCTTCCTGGGTGCTGCCATCTTCATTGAGGGCGACCGCCGGCGGGCCCAGCTGCACGTTCAGGGTCTGTTGCGTGAGGCCGGGCCTGCTGATGACCGCATCGTGGTGCCCCAGAGAGGACGCTCCACCCGGGTCCCCGTGTCCAGTGTGCTCATCTGA

Related Sequences

bmy_00802T0 Protein

Length: 477 aa      View alignments
>bmy_00802T0
MSGSDTAPFLSQADDTDDGPAPGNPGLPESMGNPKSEDPEVPDREGLQRITGLSSGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFDIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPRERFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSVFYFAIPVGSGLGYIAGSKVKDAAGDWHWALRVTPGLGVVAVVLLFLVVREPPRGAVERHSDSPPLNPTSWWADLRALARNLIFGLITCLTGVLGVGLGVEISHRLRRSNPRADPLVCAAGLLGSSPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRQGWPPSFLSEFRALQFSLMLCAFMGALGGAAFLGAAIFIEGDRRRAQLHVQGLLREAGPADDRIVVPQRGRSTRVPVSSVLI*