Part of scaffold_13 (Scaffold)

For more information consult the page for scaffold_13 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NSMCE1 ENSTTRG00000008983 (Bottlenosed dolphin)

Gene Details

non-SMC element 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008518, Bottlenosed dolphin)

Protein Percentage 53.16%
cDNA percentage 61.32%
Ka/Ks Ratio 0.29193 (Ka = 0.4575, Ks = 1.5671)

BT.43646 ENSBTAG00000002176 (Cow)

Gene Details

non-structural maintenance of chromosomes element 1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051539, Cow)

Protein Percentage 93.53%
cDNA percentage 93.33%
Ka/Ks Ratio 0.11669 (Ka = 0.029, Ks = 0.2481)

NSMCE1  (Minke Whale)

Gene Details

non-SMC element 1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU011882, Minke Whale)

Protein Percentage 55.23%
cDNA percentage 62.76%
Ka/Ks Ratio 0.30563 (Ka = 0.4231, Ks = 1.3843)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 723 bp    Location:3182176..3193774   Strand:+
>bmy_00813
ATGGCTTCAGATTTTGCAGAGAATGAGCTGGATCTGTTTAGAAAGGCTTTGGAACTGATTATTGACTCAGAAACTGGCTTTGCATCTTCCACAAATATTTTGAACCTGGTTGATCAGCTTAAAGGCAAGAAGATGAGGAAGAAGGAAGCCGAGCATGTGCTGCAGAAGTTCGTACAAAACAAATGGCTGATTGAGAATGCATCACAGTTTTTCCTCCAAAACCATATTGTATCTAACGGACGTCTGTTGAGCCAGGCCCGTTCGGGTCCCTTCTCTGCTTTGAGGCCCACAGTGACCCTGCGAGGACGACTGGAACCTCCTGTTCATTCACGTGACCTGGGGGAGCCCCAGCTGGAAGTGGCAGAGCCGTGGGTCCCAGACTCTGCTCCCCAGGCAGGCCATGTAAAGGAAGGGGAGTTCACGCTGCACGGCCGGGCCATCCTGGAGATGGAGCAGTACATCCGGGAGACGTACCCCGACGCCGTGAAGGTCTGCACCATCTGCCACAGCCTCCTCATTCAGGGTCAAAGCTGCGAGACCTGTGGAATCAGGATGCACTTGCCTTGTGTGGCCAAGTACTTCCAGTCCAGCTCGGAGCCGCGCTGCCCCCATTGCAACGACTACTGGCCCCACGAGATACCAGAAGTCTTTGACCCCGAGAAGGAGAGGGAGGCCGGCATCTCCAAATCGAACAAAAGGTCCTTGCGATCCAGGCAGCACTAG

Related Sequences

bmy_00813T0 Protein

Length: 241 aa      View alignments
>bmy_00813T0
MASDFAENELDLFRKALELIIDSETGFASSTNILNLVDQLKGKKMRKKEAEHVLQKFVQNKWLIENASQFFLQNHIVSNGRLLSQARSGPFSALRPTVTLRGRLEPPVHSRDLGEPQLEVAEPWVPDSAPQAGHVKEGEFTLHGRAILEMEQYIRETYPDAVKVCTICHSLLIQGQSCETCGIRMHLPCVAKYFQSSSEPRCPHCNDYWPHEIPEVFDPEKEREAGISKSNKRSLRSRQH*