Part of scaffold_15 (Scaffold)

For more information consult the page for scaffold_15 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP1 ENSTTRG00000013871 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013152, Bottlenosed dolphin)

Protein Percentage 98.67%
cDNA percentage 99.16%
Ka/Ks Ratio 0.35412 (Ka = 0.0059, Ks = 0.0166)

BT.40485 ENSBTAG00000020451 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027254, Cow)

Protein Percentage 95.28%
cDNA percentage 96.12%
Ka/Ks Ratio 0.19843 (Ka = 0.0216, Ks = 0.1087)

Genome Location

Sequence Coding sequence

Length: 2037 bp    Location:1761275..1769699   Strand:+
>bmy_00823
ATGCCCGGTGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGGTAGTCCATCAAAAAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGGAAACCAAGAGAGCCTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAAACTTCTGAATATAGAGGATCTGAAATTGATCAAGTTGTTCCTGCAGCACAGTCCTCACCTGTCAACTGTGAGAAGAGAGAAAACTTGTTACCGTTTGTGGGACTGAATAATCTCGGCAATACTTGTTATCTTAATAGTATACTTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTTAATGTTATTTCAAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAGTCAAAAAGATAAGGGAAATTGCAAAGAAGATTCTTCAGCAAGTTATGAACTAATATGCAGCTTACAGTCCTTGATCATTTCAGTCGAACAGCTTCAGGCTAGTTTTCTCTTAAATCCAGAGAAATATACTGATGAACTTGCTACTCAGCCAAGGCGACTACTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGTAAAAAATGTGGCAGAGTTATCTACTAAGGTAGAAGAAAAACATCAGAAAGAGGAAATGAGTGCTAAGCAACCCAGCATTATTTCTAAATTCTGTAGTCTGGGTAAAATAACAACAAACCAAGAATCCAAAGGACAATCTAAAAATGAATATGATCTTGAAGAGGACTTGGGGAAGTATGAAAATGATAATACAGCTAATGGTTGTGGACTTGAATCTCCAGGGAATAATGTTATGCCTGTTAATGAAGTTAAGCCCATAAACAAAGGTGCAGAGCAAATTGGTTTTGAGCTAGTGGAGAAATTATTTCAAGGTCAGCTGGTATTAAGGACTCGTTGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAAGACATCAGTGTACCAGTGCAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAACAGAAATGAAGACCCTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGAAGATAAATATTTCTGTGAAAATTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTGACAAAATGCCTGAGGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAACTGTCACTAGAAGAATGGAGCACAAAGCCAACCAATGACAGCTATGGATTATTTGCAGTTGTGATGCATAGTGGCATTACAATTAGTAGTGGGCATTATACTGCTTCTGTTAAAGTCACTGACCTTAATAGTTTAGAACTAGATAAGGAAAATTTTGTGATCGACCAAATGTGTGAGATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTCGAAAACTATGATGATGAAGAAGTGTCGATTAGAGTCAGTGGAAATACCCAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGTAAAGCAGATTATGAGTTATACAACAAAGCATCTAATCCTGATAAAGTTGCCAGTACAGCATTTGCTGACAATAGAAATTCTGAGGCTAACAATACTAATGGGACCCATGAATCTGATAGAAACAAGGAATCCAGTGACCAAACAGGCATTAACATGAGTGGTTTTGAAAACAAAATTTCATATGTAGTGCAAAGCTTAAAGGAGTATGAGGGGAAGTGGTTGCTTTTTGATGATTCTGAAGTGAAAGTTACTGAAGAGAAGGACTTTTTGAATTCTCTTTCTCCTTCTACATCTCCTACATCTACTCCTTACTTGCTATTTTATAAGAAATTA

Related Sequences

bmy_00823T0 Protein

Length: 679 aa      View alignments
>bmy_00823T0
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKTSEYRGSEIDQVVPAAQSSPVNCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNVISRKKEALKDEASQKDKGNCKEDSSASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEVKNVAELSTKVEEKHQKEEMSAKQPSIISKFCSLGKITTNQESKGQSKNEYDLEEDLGKYENDNTANGCGLESPGNNVMPVNEVKPINKGAEQIGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTDLNSLELDKENFVIDQMCEIGKPEPLNEEEARGVVENYDDEEVSIRVSGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFADNRNSEANNTNGTHESDRNKESSDQTGINMSGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKKL