Sequence detailsbmy_00823 (Coding sequence)

Part of scaffold_15 (SequenceType object (1))

For more information consult the page for scaffold_15 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP1ENSTTRG00000013871 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013152, Bottlenosed dolphin)

Protein Percentage 98.67%
cDNA percentage 99.16%
Ka/Ks Ratio 0.35412 (Ka = 0.0059, Ks = 0.0166)

BT.40485ENSBTAG00000020451 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027254, Cow)

Protein Percentage 95.28%
cDNA percentage 96.12%
Ka/Ks Ratio 0.19843 (Ka = 0.0216, Ks = 0.1087)

Genome Location

Sequence SequenceType object (2)

Length: 2037 bp    Location:1761275..1769699   Strand:+
Raw sequence 
>bmy_00823
ATGCCCGGTGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGGTAGTCCATCAAAAAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGGAAACCAAGAGAGCCTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAAACTTCTGAATATAGAGGATCTGAAATTGATCAAGTTGTTCCTGCAGCACAGTCCTCACCTGTCAACTGTGAGAAGAGAGAAAACTTGTTACCGTTTGTGGGACTGAATAATCTCGGCAATACTTGTTATCTTAATAGTATACTTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTTAATGTTATTTCAAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAGTCAAAAAGATAAGGGAAATTGCAAAGAAGATTCTTCAGCAAGTTATGAACTAATATGCAGCTTACAGTCCTTGATCATTTCAGTCGAACAGCTTCAGGCTAGTTTTCTCTTAAATCCAGAGAAATATACTGATGAACTTGCTACTCAGCCAAGGCGACTACTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGTAAAAAATGTGGCAGAGTTATCTACTAAGGTAGAAGAAAAACATCAGAAAGAGGAAATGAGTGCTAAGCAACCCAGCATTATTTCTAAATTCTGTAGTCTGGGTAAAATAACAACAAACCAAGAATCCAAAGGACAATCTAAAAATGAATATGATCTTGAAGAGGACTTGGGGAAGTATGAAAATGATAATACAGCTAATGGTTGTGGACTTGAATCTCCAGGGAATAATGTTATGCCTGTTAATGAAGTTAAGCCCATAAACAAAGGTGCAGAGCAAATTGGTTTTGAGCTAGTGGAGAAATTATTTCAAGGTCAGCTGGTATTAAGGACTCGTTGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAAGACATCAGTGTACCAGTGCAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAACAGAAATGAAGACCCTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGAAGATAAATATTTCTGTGAAAATTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTGACAAAATGCCTGAGGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAACTGTCACTAGAAGAATGGAGCACAAAGCCAACCAATGACAGCTATGGATTATTTGCAGTTGTGATGCATAGTGGCATTACAATTAGTAGTGGGCATTATACTGCTTCTGTTAAAGTCACTGACCTTAATAGTTTAGAACTAGATAAGGAAAATTTTGTGATCGACCAAATGTGTGAGATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTCGAAAACTATGATGATGAAGAAGTGTCGATTAGAGTCAGTGGAAATACCCAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGTAAAGCAGATTATGAGTTATACAACAAAGCATCTAATCCTGATAAAGTTGCCAGTACAGCATTTGCTGACAATAGAAATTCTGAGGCTAACAATACTAATGGGACCCATGAATCTGATAGAAACAAGGAATCCAGTGACCAAACAGGCATTAACATGAGTGGTTTTGAAAACAAAATTTCATATGTAGTGCAAAGCTTAAAGGAGTATGAGGGGAAGTGGTTGCTTTTTGATGATTCTGAAGTGAAAGTTACTGAAGAGAAGGACTTTTTGAATTCTCTTTCTCCTTCTACATCTCCTACATCTACTCCTTACTTGCTATTTTATAAGAAATTA

Related Sequences

bmy_00823T0 SequenceType object (3)

Length: 679 aa      View alignments
>bmy_00823T0
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKTSEYRGSEIDQVVPAAQSSPVNCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNVISRKKEALKDEASQKDKGNCKEDSSASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEVKNVAELSTKVEEKHQKEEMSAKQPSIISKFCSLGKITTNQESKGQSKNEYDLEEDLGKYENDNTANGCGLESPGNNVMPVNEVKPINKGAEQIGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTDLNSLELDKENFVIDQMCEIGKPEPLNEEEARGVVENYDDEEVSIRVSGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFADNRNSEANNTNGTHESDRNKESSDQTGINMSGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKKL