Part of scaffold_15 (Scaffold)

For more information consult the page for scaffold_15 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATG4C ENSTTRG00000013910 (Bottlenosed dolphin)

Gene Details

autophagy related 4C, cysteine peptidase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013192, Bottlenosed dolphin)

Protein Percentage 83.22%
cDNA percentage 87.65%
Ka/Ks Ratio 0.6524 (Ka = 0.126, Ks = 0.1932)

BT.31619 ENSBTAG00000010124 (Cow)

Gene Details

cysteine protease ATG4C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013356, Cow)

Protein Percentage 81.59%
cDNA percentage 85.39%
Ka/Ks Ratio 0.42337 (Ka = 0.1358, Ks = 0.3208)

ATG4C  (Minke Whale)

Gene Details

autophagy related 4C, cysteine peptidase

External Links

Gene match (Identifier: BACU020148, Minke Whale)

Protein Percentage 74.23%
cDNA percentage 82.58%
Ka/Ks Ratio 0.76156 (Ka = 0.1946, Ks = 0.2555)

Genome Location

Sequence Coding sequence

Length: 1311 bp    Location:2085275..2123095   Strand:+
>bmy_00827
ATGGAGAGTAATGGGATTATAGTACCATTATTGACATTTCTTTGCATTTATTTAGAGTATAGTTTATGTTTTTATTTTGTAGATGAAAATGAACTGTTACCTGTAAGCTCAGGATGTACAGTAGAAGATCATGTGATTGCGGGAAGTGTAGAAGAATTTCGTAAAGACTTCATTTCAAGAATATGGCTTACCTACAGGGAAGAGTTTCCTCCAATAGAAGGCTCAGCTTTGACAACAGACTGTGGTTGGGGCTGTACACTAAGAACTGGCCAGATGCTGTTGGCTCAAGGACTCGTACTACACTTCCTTGGTAGAGCTTGGACCTGGCCTGATGCTTTGAACATTGAAAATTCAGACTCTGAATCATGGACTTCCAACACTGTAAAAAAATTTACTGCATCATTTGAAGCATCGCTTTCAGTGGAAAGAGAACTCAAAACCCCAACAATTTCTCTGAAGGAAACAATCGGGAGATATTCTGATGATCGTGAAATGCAAAATGAAATTTATCACAGGAAAATCATCTCTTGGTTTGGTGATTCCCGCTTGGCTCTCTTTGGTTTACATCAACTAATAGAATATGGAAAGAAGTCTGGGAAAAAAGCTGGAGATTGGTATGGACCAGCTGTGGTTGCTCACATTTTAAGAAAAGCAGTTGAAGAAGCAAGACACCCAGATTTACAAGGAATAACTATTTATGTTGCGCAAGATTGTACAGTTTACAGTTCTGATGTAATTGATAAACAGTGCACTTCCATGGCCTCTGATAATACAGATGACAAAGCTGTTATTATTCTAGTTCCTGTTAGACTTGGTGGAGAAAGAACCAATGCCGACTATTTAGATTTTGTAAAGGGTATTTTAAGCCTTGAATATTGTGTGGGTATTGTTGGTGGCAAACCTAAACAGTCATATTACTTTGCTGGATTTCAAGATGACAGTTTGATTTACATGGATCCTCATTACTGCCAATCTTTTGTAGATGTCAGCATAAAGGATTTCCCTCTTGAGACATTCCACTGCCCTTCTCCCAAAAAGATGTCATTTCGAAAAATGGATCCTAGCTGTACAATAGGATTTTACTGTCGAAATGTTCAGGACTTCAAACGAGCTTCTGAAGAAATCACTAAGGAAGCCTATTTGTTAGGTGTACAGTTACATGCAAAACTGAAAGAGGGTGGGCAGATAGACTGCTTTGGTATGCCTGACGAGAGAAATCAGATGAAATCTGGACAAGTTAAGTATGGTACTGATTTTCCTAGAATGCGAAAGCAGTACAGGTACAACAAGAAGCCAGTGGTTGAATTTTGA

Related Sequences

bmy_00827T0 Protein

Length: 437 aa      View alignments
>bmy_00827T0
MESNGIIVPLLTFLCIYLEYSLCFYFVDENELLPVSSGCTVEDHVIAGSVEEFRKDFISRIWLTYREEFPPIEGSALTTDCGWGCTLRTGQMLLAQGLVLHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSVERELKTPTISLKETIGRYSDDREMQNEIYHRKIISWFGDSRLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNTDDKAVIILVPVRLGGERTNADYLDFVKGILSLEYCVGIVGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKEAYLLGVQLHAKLKEGGQIDCFGMPDERNQMKSGQVKYGTDFPRMRKQYRYNKKPVVEF*