Sequence detailsbmy_00827 (Coding sequence)

Part of scaffold_15 (SequenceType object (1))

For more information consult the page for scaffold_15 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATG4CENSTTRG00000013910 (Bottlenosed dolphin)

Gene Details

autophagy related 4C, cysteine peptidase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013192, Bottlenosed dolphin)

Protein Percentage 83.22%
cDNA percentage 87.65%
Ka/Ks Ratio 0.6524 (Ka = 0.126, Ks = 0.1932)

BT.31619ENSBTAG00000010124 (Cow)

Gene Details

cysteine protease ATG4C

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013356, Cow)

Protein Percentage 81.59%
cDNA percentage 85.39%
Ka/Ks Ratio 0.42337 (Ka = 0.1358, Ks = 0.3208)

ATG4C (Minke Whale)

Gene Details

autophagy related 4C, cysteine peptidase

External Links

Gene match (Identifier: BACU020148, Minke Whale)

Protein Percentage 74.23%
cDNA percentage 82.58%
Ka/Ks Ratio 0.76156 (Ka = 0.1946, Ks = 0.2555)

Genome Location

Sequence SequenceType object (2)

Length: 1311 bp    Location:2085275..2123095   Strand:+
Raw sequence 
>bmy_00827
ATGGAGAGTAATGGGATTATAGTACCATTATTGACATTTCTTTGCATTTATTTAGAGTATAGTTTATGTTTTTATTTTGTAGATGAAAATGAACTGTTACCTGTAAGCTCAGGATGTACAGTAGAAGATCATGTGATTGCGGGAAGTGTAGAAGAATTTCGTAAAGACTTCATTTCAAGAATATGGCTTACCTACAGGGAAGAGTTTCCTCCAATAGAAGGCTCAGCTTTGACAACAGACTGTGGTTGGGGCTGTACACTAAGAACTGGCCAGATGCTGTTGGCTCAAGGACTCGTACTACACTTCCTTGGTAGAGCTTGGACCTGGCCTGATGCTTTGAACATTGAAAATTCAGACTCTGAATCATGGACTTCCAACACTGTAAAAAAATTTACTGCATCATTTGAAGCATCGCTTTCAGTGGAAAGAGAACTCAAAACCCCAACAATTTCTCTGAAGGAAACAATCGGGAGATATTCTGATGATCGTGAAATGCAAAATGAAATTTATCACAGGAAAATCATCTCTTGGTTTGGTGATTCCCGCTTGGCTCTCTTTGGTTTACATCAACTAATAGAATATGGAAAGAAGTCTGGGAAAAAAGCTGGAGATTGGTATGGACCAGCTGTGGTTGCTCACATTTTAAGAAAAGCAGTTGAAGAAGCAAGACACCCAGATTTACAAGGAATAACTATTTATGTTGCGCAAGATTGTACAGTTTACAGTTCTGATGTAATTGATAAACAGTGCACTTCCATGGCCTCTGATAATACAGATGACAAAGCTGTTATTATTCTAGTTCCTGTTAGACTTGGTGGAGAAAGAACCAATGCCGACTATTTAGATTTTGTAAAGGGTATTTTAAGCCTTGAATATTGTGTGGGTATTGTTGGTGGCAAACCTAAACAGTCATATTACTTTGCTGGATTTCAAGATGACAGTTTGATTTACATGGATCCTCATTACTGCCAATCTTTTGTAGATGTCAGCATAAAGGATTTCCCTCTTGAGACATTCCACTGCCCTTCTCCCAAAAAGATGTCATTTCGAAAAATGGATCCTAGCTGTACAATAGGATTTTACTGTCGAAATGTTCAGGACTTCAAACGAGCTTCTGAAGAAATCACTAAGGAAGCCTATTTGTTAGGTGTACAGTTACATGCAAAACTGAAAGAGGGTGGGCAGATAGACTGCTTTGGTATGCCTGACGAGAGAAATCAGATGAAATCTGGACAAGTTAAGTATGGTACTGATTTTCCTAGAATGCGAAAGCAGTACAGGTACAACAAGAAGCCAGTGGTTGAATTTTGA

Related Sequences

bmy_00827T0 SequenceType object (3)

Length: 437 aa      View alignments
>bmy_00827T0
MESNGIIVPLLTFLCIYLEYSLCFYFVDENELLPVSSGCTVEDHVIAGSVEEFRKDFISRIWLTYREEFPPIEGSALTTDCGWGCTLRTGQMLLAQGLVLHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSVERELKTPTISLKETIGRYSDDREMQNEIYHRKIISWFGDSRLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNTDDKAVIILVPVRLGGERTNADYLDFVKGILSLEYCVGIVGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKEAYLLGVQLHAKLKEGGQIDCFGMPDERNQMKSGQVKYGTDFPRMRKQYRYNKKPVVEF*