Part of scaffold_14 (Scaffold)

For more information consult the page for scaffold_14 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFAP2A ENSTTRG00000012832 (Bottlenosed dolphin)

Gene Details

transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012174, Bottlenosed dolphin)

Protein Percentage 79.04%
cDNA percentage 78.82%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.02)

TFAP2A ENSBTAG00000001250 (Cow)

Gene Details

Transcription factor AP-2-alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001651, Cow)

Protein Percentage 99.08%
cDNA percentage 97.18%
Ka/Ks Ratio 0.03023 (Ka = 0.0039, Ks = 0.1298)

TFAP2A  (Minke Whale)

Gene Details

transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)

External Links

Gene match (Identifier: BACU005139, Minke Whale)

Protein Percentage 87.39%
cDNA percentage 90.6%
Ka/Ks Ratio 0.57391 (Ka = 0.0718, Ks = 0.1251)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1614 bp    Location:423170..439955   Strand:+
>bmy_00853
ATGAAAATGCTTTGGAAACTGACGGATAATATCAAGTACGAGGACTGCGAGGTAAGCGCGGCGCTAGCTCAGTCGTCCTCGCGGCCGCAGGCTCGGAGCCGTACTTCCCGCTCCTCCTCCTCTCCTCGAAGCCAGCTGCGAGTCGAGCTCCCTGCGTTTGGGGAAGGGCCCTTTTCCCTCCCGGGAGTATTTGCTGAAAAGAACCGCCTAGGGCTCCTTTCTCGCGGCGGCCTGCGGACGGGGACAGGCCGTTTCCCACGCAGCCCTGAGCCGTGCACTCAGTGTGGCAGCTGTAACTCGACGCCTGATTTCTTGTTCTCTGCCCTTGCCCTCGCTCTCTTCCAGGACCGTCACGACGGCACCAGCAACGGGACGGCACGGTTGCCCCAGCTGGGCACTGTAGGTCAATCTCCCTACACGAGCGCCCCGCCGCTGTCCCACACCCCCAATGCCGACTTCCAGCCCCCCTACTTCCCCCCGCCCTACCAGCCTATCTACCCCCAGTCGCAAGACCCTTACTCCCACGTCAACGACCCCTACAGCCTGAACCCACTGCACGCCCAGCCGCAGCCGCAGCACCCGGGCTGGCCCGGCCAGAGGCAGAGCCAGGAGTCTGGGCTCCTGCACGCGCACCGGGGGCTGCCCCACCAGCTGTCGGGCCTGGATCCCCGCAGGGACTACCGGCGGCACGAAGACCTCCTGCACGGCCCCCATGGGCTCGGCTCAGGACTCGGAGACCTCCCGATCCACTCCTTACCTCACGCCATCGAGGACGTTCCGCATGTAGAAGACCCGGGTATTAACATCCCAGATCAAACTGTAATTAAGAAAGGCCCCGTGTCCCTGTCCAAGTCCAACAGCAACGCCGTCTCCGCCATCCCCATCAACAAGGACAACCTCTTCGGCGGCGTCGTGAACCCCAACGAAGTCTTTTGTTCAGTTCCGGGTCGTCTCTCGCTCCTCAGCTCCACCTCGAAGTACAAGGTCACGGTGGCGGAAGTACAGCGGCGCCTCTCACCGCCGGAGTGTCTCAACGCTTCGCTGCTGGGCGGAGTGCTGCGGAGGGCGAAGTCTAAAAATGGAGGAAGATCTTTAAGAGAAAAACTGGACAAAATAGGATTAAATCTGCCAGCAGGGAGGCGTAAAGCTGCCAATGTCACCCTGCTCACATCACTAGTGGAGGGAGAGGCCGTCCACCTCGCCAGGGACTTTGGGTATGTGTGCGAAACTGAATTTCCTGCCAAAGCAGTAGCTGAATTTCTCAACCGACAACATTCCGATCCCAATGAGCAAGTGACAAGAAAAAACATGCTCCTGGCTACAAAACAGATATGCAAGGAGTTCACCGACCTGCTGGCTCAGGACCGATCTCCCCTGGGGAACTCGAGGCCCAACCCCATCCTGGAGCCCGGCATCCAGAGCTGCTTGACCCACTTCAACCTCATCTCCCACGGCTTCGGCAGCCCGGCGGTGTGCGCCGCGGTCACGGCCCTGCAGAACTATCTCACCGAGGCCCTGAAGGCCATGGACAAAATGTACCTCAGCAACAACCCGAACAGCCACACGGACAGCAGCGCCAAAAGCAGTGACAAAGAGGAGAAACACAGAAAGTGA

Related Sequences

bmy_00853T0 Protein

Length: 538 aa      View alignments
>bmy_00853T0
MKMLWKLTDNIKYEDCEVSAALAQSSSRPQARSRTSRSSSSPRSQLRVELPAFGEGPFSLPGVFAEKNRLGLLSRGGLRTGTGRFPRSPEPCTQCGSCNSTPDFLFSALALALFQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHAHRGLPHQLSGLDPRRDYRRHEDLLHGPHGLGSGLGDLPIHSLPHAIEDVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDSSAKSSDKEEKHRK*