Part of scaffold_14 (Scaffold)

For more information consult the page for scaffold_14 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAGE1 ENSTTRG00000017334 (Bottlenosed dolphin)

Gene Details

cancer antigen 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016425, Bottlenosed dolphin)

Protein Percentage 79.2%
cDNA percentage 84.17%
Ka/Ks Ratio 1.37317 (Ka = 0.0823, Ks = 0.06)

CAGE1 ENSBTAG00000014587 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019419, Cow)

Protein Percentage 76.23%
cDNA percentage 86.53%
Ka/Ks Ratio 0.78313 (Ka = 0.1435, Ks = 0.1833)

CAGE1  (Minke Whale)

Gene Details

cancer antigen 1

External Links

Gene match (Identifier: BACU018228, Minke Whale)

Protein Percentage 92.17%
cDNA percentage 94.5%
Ka/Ks Ratio 1.2217 (Ka = 0.0601, Ks = 0.0492)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1812 bp    Location:2899930..2929334   Strand:+
>bmy_00861
ATGATCTTTCTACTCTTTCATACTTATTTTATTTACTGTAATTTACAGATTGCAGGYTCTTCAAAAGGAATACAGAATTCTACGGATATTCCTGAGATGTCAGTCAGGCACCAAAAGGAAGTCACAGTGGAGGGGAGGGAGAGTCCAGAGATTGTCTCAGCTTGGTCTCCGACAGGCATTTCTTGGAGTGGTGGAGCAGCTCGGGAGGACTGCATGACACCCGACACAGAGCAGAGCTTGGAAAGCTCACAACCTCTGGAAGAGGACATGGCTCTAAACGAAGTCCTACGAAAATTAAAACGTACTAACAAAGAACAGCAAACTCTGATCCAAGACCTACAGCGTAGTAACATGTATTTAGAGAAGAAGGTTGAAGAACTGCAGATGAAGACAACTAAACAGCACGTGTTCGTGGACATCATCAATAAGCTAAAGGAGAATGTTGAAGAATTAATTGAAGACAAATACAGAGTAATGCTAGAGAAGAATGATACAGAGAAGACATTGCAGGATTTGCATGAGATTTTAGTTAACACCCAAAAACATCTTCAGGAATCCAGGAATGAAAAGGAAACCTTACAGCTAGAGTTTAAGAAGATCAAGGGCAATTATGTTAGTCTACAGGAAAGGTACATGACTGAAATACAACAAAAAAATAAAGCTGCAAGTCAGTGCATGGAGATGGACAGAGCCTTAAGCAAGAAAGAAGAAGAGGTAGAGAGGCTGCAGCAACTCAAAGGAGAACTGGAAAAGGCCACCACTTCTGCTCTGGACTTGTTGAAAAAGGAAAAAGAGACCCGAGAACAAGAGTTCCTGTCTTTACAGGAGGAATTTCAGAAACGTGAAAAGGAAAACTTGGGTGAAAGACAGAAACTGAAATCTAGACTTGAGAAATTGGTCGCTCAAGTTCAAAATTTGCAGTTCATATCCGACAATGAAAAGGCTAAGAATACAGAACTCCAGCAGCAGATCAACAAAGTAAAAAGTGAAAACTCAAAACTTCAGCAGCAGGTTGCAAGGAGTGAGGAGCAAAATTATGTCCCTAAATGTGAGATAGCTCAACTCAAGGAGAACTTAGAGGAAGGAATAGAGTCAGATATGGCAAAGGATGCAAAGATGATACATTCTAATTTGTTCCTGAATCACTCACCTTGTGAAGGAGAGAGCCTGAATCCCCCAGACATGAAAAGAACTTCGCAGCTGACCTCCAAAGTTTGCAATCTTCTGGCTCTGATGGTACGACTTCTCATGTGCCAGGACATCACCAATCCCGATGCCGAACATTTCAAAGAGAATGAGAAAATTAGTGATATCATGCTACAAAAATTGAAGAGTTTTCATCTTAAAAAGAAAAAGTTAGATAAAGAGCTACTGAAGCATAAAGACAGAATCACAGCTTTCAGAGAGTTAATTGCTAATGAAAAATCATTTCAAGATCAGGATACTGAGGTTACAGACTTTGATTCAAATGAAGCCAAGAATGTCGGAGACGTACCTGTCTTACTGGGAGCCAAACTGGATCAGTACCACAGCCTAAATGAAGAGCTTGATTTCTTGATTGCAAAACTGGGAAATCTTCTAGAGTTAAAAGAAGACCACTGCAACAGACTCATTGAAGAAAATGACAAGTATCGAAGACATTTAGGCAACTTAATAAATAAGGTTACATCATACGAAGAAATTATCGAATGTGCTGACCGAAGGCTCATGATATCGAACTCCCAGATTGCACAACTGAGAAGTCATCCGAAGTCCATGACCGTGGTAGGTCATACTGATGATAATTATAAAGAATGCTATATTCCCATGTAA

Related Sequences

bmy_00861T0 Protein

Length: 604 aa      View alignments
>bmy_00861T0
MIFLLFHTYFIYCNLQIAGSSKGIQNSTDIPEMSVRHQKEVTVEGRESPEIVSAWSPTGISWSGGAAREDCMTPDTEQSLESSQPLEEDMALNEVLRKLKRTNKEQQTLIQDLQRSNMYLEKKVEELQMKTTKQHVFVDIINKLKENVEELIEDKYRVMLEKNDTEKTLQDLHEILVNTQKHLQESRNEKETLQLEFKKIKGNYVSLQERYMTEIQQKNKAASQCMEMDRALSKKEEEVERLQQLKGELEKATTSALDLLKKEKETREQEFLSLQEEFQKREKENLGERQKLKSRLEKLVAQVQNLQFISDNEKAKNTELQQQINKVKSENSKLQQQVARSEEQNYVPKCEIAQLKENLEEGIESDMAKDAKMIHSNLFLNHSPCEGESLNPPDMKRTSQLTSKVCNLLALMVRLLMCQDITNPDAEHFKENEKISDIMLQKLKSFHLKKKKLDKELLKHKDRITAFRELIANEKSFQDQDTEVTDFDSNEAKNVGDVPVLLGAKLDQYHSLNEELDFLIAKLGNLLELKEDHCNRLIEENDKYRRHLGNLINKVTSYEEIIECADRRLMISNSQIAQLRSHPKSMTVVGHTDDNYKECYIPM*