Part of scaffold_14 (Scaffold)

For more information consult the page for scaffold_14 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SSR1 ENSTTRG00000017333 (Bottlenosed dolphin)

Gene Details

signal sequence receptor, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016424, Bottlenosed dolphin)

Protein Percentage 88.03%
cDNA percentage 86.87%
Ka/Ks Ratio 0.08464 (Ka = 0.0083, Ks = 0.0986)

SSR1 ENSBTAG00000022731 (Cow)

Gene Details

Translocon-associated protein subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008253, Cow)

Protein Percentage 96.5%
cDNA percentage 91.84%
Ka/Ks Ratio 0.0529 (Ka = 0.0166, Ks = 0.3145)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:2940859..2964189   Strand:+
>bmy_00862
ATGAAGTCCCTCCCCCGCCTGCTGCTGCTTCTCCTGCTGGTGTTCCCCGCCACTCTCTTGCTCCGAGGCCGCCCTGGAGGCTCATTGGCAGCGGCTCAAGATCTTACAGAAGATGAAGAAACGGTGGAAGATTCTGTAATTGAAGATGAMGATGATGAAGCAGAAGTGGAAGAAGATGAACCCACAGATTTGGCTGAAGATAAAGAGGAAGAAGATGTATCTGGTGAACCTGAAGCTTCACCAAGTGCAGATACAACCATCCTGTTTGTGAAAGGAGAAGATTTTCCAGCAAATAACATTGTGAAGTTCCTGGTAGGCTTTACAAACAAGGGTACAGAAGATTTTATTGTTGAATCTCTGGACGCCTCATTCCGTTATCCTCAGGACTACCAGTTTTATATCCAGAATTTCACAGCTCTTCCTCTGAATACTGTAGTGCCACCCCAGAGACAGGCAACTTTTGAGTACTCCTTCATTCCTGCAGAGCCCATGGGTGGACGGCCCTTTGGTCTAGTCATCAATCTGAACTACAAAGATTTGAACGGCAATGTTTTCCAAGATGCTGTCTTCAATCAAACAGTTACAATTATTGAGAGAGAAGACGGGCTAGATGGAGAAACAATCTTTATGTATATGTTCCTTGCTGGTCTTGGGCTTTTGGTGGTGGTTGGCCTTCATCAACTCCTAGAATCTAGAAAGCGCAAGAGACCCATACAGAAGGTAGAGACGGGTACCTCAAGTCAGAGTGATGTTGACATGAGCTGGATTCCTCAGGAAACTTTGAATCAGATCAATAAAGCTTCACCAAGAAGGTTGCCCAGGAAACGGGCACAGAAGAGATCGGTGGGATCTGATGAGTAA

Related Sequences

bmy_00862T0 Protein

Length: 287 aa      View alignments
>bmy_00862T0
MKSLPRLLLLLLLVFPATLLLRGRPGGSLAAAQDLTEDEETVEDSVIEDXDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKRPIQKVETGTSSQSDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE*