Sequence detailsbmy_00877 (Coding sequence)

Part of scaffold_17 (SequenceType object (1))

For more information consult the page for scaffold_17 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAF1ENSTTRG00000009322 (Bottlenosed dolphin)

Gene Details

Fas (TNFRSF6) associated factor 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008840, Bottlenosed dolphin)

Protein Percentage 92.95%
cDNA percentage 94.39%
Ka/Ks Ratio 0.52284 (Ka = 0.048, Ks = 0.0918)

FAF1ENSBTAG00000014482 (Cow)

Gene Details

FAS-associated factor 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019259, Cow)

Protein Percentage 93.57%
cDNA percentage 93.57%
Ka/Ks Ratio 0.22643 (Ka = 0.0391, Ks = 0.1727)

Additional orthologs identified in other species via the OPTIC pipeline.

FAF1 (Human)   Faf1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2322 bp    Location:955159..1306432   Strand:+
Raw sequence 
>bmy_00877
ATGTTGATGATGGTAGACCATTACTTAAATAGTGAAGAGAGAGAGGAAACATCTCCAGAAATAAGTTGTCTACAATTGGCAGCTATCAATGGTGTAATACCCCAGGAAAATGGCATTCTGAGAAGTGACTATGGGGGTGAGCCTATATCAGGACCTGCATTTGATCCAGCAAGTCACCCAGCTCCAGCTCCTGCTCCTGCTCCCTCTTCCTCTTCAGCATTTCGACCTGTAATGCCATCTAGGCAAATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTGGAGTACAGAGACAGAAATGTCGATGTGGTGCTTGAAGACAGCTGTACCGTTGGAGAAATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCTAAAATGCTGTTAAAAGGCTGGAAGACTGGAGATGTGGAAGACAGTATGGTCTTAAAATCACTACACTTGCCAAAAAACAACAGTCTTTATGTTCTTACACCAGATTTGCCACCACCTTCATCATCTAGTCATGCTGGCCCTTTCAGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGAACTTCTCAGGAAGCAGTACCATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACGAGTATCCCTGTTCGCCATCAGTTATGGGAGGGCTGGCCATCTTCTGCCACAGATGACTCCATGTGTCTTGCTGAATCAGGGCTCTCTTATCCGTGCCATCGACTTACAGTGGGAAGAAGATCTTCACCTGCACAGACCCGGGAGCAATCCGAAGAGCAAAGCACCGATGTTCATATGGTTAGTGATAGTGATGGAGATGACTTTGAAGATGCTTCCGAATTTGGGGTGGATGATGGAGAAGTATTCGGCATGGCGTCATCTGCCTTGAGAAAATCTCCAATGATGCCAGAAAACGCAGAAAATGAAGGAGATGCCTTATTACAATTTACAGCAGAGTTTTCTTCAAGATATGGTGACTGCCATCCTGTATTTTTTATTGGCTCATTAGAAGCAGCTTTTCAAGAGGCCTTCTATGTGAAAGCCCGAGATGTTAAAAGAAACCTAAATAACCATCACTGGTCAATATTTGTTAGGCAAAATAAGTTCTATACAAATCGGAAGCCACAACTGCAGTTGAGAAAGCTTCTTGCTGTCTACCTCCACCACGATGAAAGTGTATTAACCAACGTGTTCTGCTCACAAATGCTTTGTGCTGAATCTATCGTCTCTTATCTGAGTCAAAATTTTATAACCTGGGCTTGGGACCTGACAAAGGACGCCAACAGAGCAAGATTTCTGACAATGTGCAATAGACACTTTGGCAGCGTTGTTGCACAAACCATTCGGACTCAAAAAACAGATCAGTTTCCACTTTTTCTGATTATTATGGGAAAGCGATCATCTAATGAAGTGTTAAATGTGATACAAGGTAACACAACAGTGGATGAGTTAATGATGAGACTCATGGCTGCAATGGAGATCTTCACGGCCCAACAACAGGAAGATATAAAGGATGAGGATGAACGAGAAGCCAGAGAAAATGTGAAGAGAGAACAAGACGAGGCCTATCGCCTTTCACTTGAGGCTGACAGAGCAAAGAGGGAAGCTCATGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAACAGATTCGCAAAGAACAAGAAGAGGAACGTGAGGCCATCAGACTCTCGTTAGAGCAGGCCCTGCCTCCAGAGCCAAAGGAAGAAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGACACCCAGTGGCGAGTTCCTCGAGCGGCGTTTCCTGGCCAGCAATAAGCTCCAGATCGTCTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGGATGAATTCAAGTTACTGAGTACCTTTCCTAGGAGAGATGTAACCCAGCTGGACCCAAATAAATCATTATTGGAGAATTTAATTGTTCCGACCCAAGGGTCTGCTGTGTGCCAGGACCCTGGCGATGTAKCACAACAGGAAGCAAAGCAAAGGGAAGCAGAAATGAGAAACAGTATCTTAGCCCAAGTTCTGGATCAGTCAGCCCGGGCCCGATTAAGTAACTTAGCACTTGTAAAGCCTGAGAAAACTAAAGCAGTAGAGAATTACCTTATACAGATGGCACGGTATGGACAACTAAGTGGGAAGGTATCAGAACAAGGTTTAATAGAAATCCTCGAGAAAGTAAGCCAACAAACAGAAAAGAAAACAACAGTTAARTTCAGCAGAAGAAAAGTAATGGACTCTGATGAAGATGACGATTATTGA

Related Sequences

bmy_00877T0 SequenceType object (3)

Length: 774 aa      View alignments
>bmy_00877T0
MLMMVDHYLNSEEREETSPEISCLQLAAINGVIPQENGILRSDYGGEPISGPAFDPASHPAPAPAPAPSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDSCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSMVLKSLHLPKNNSLYVLTPDLPPPSSSSHAGPFSALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPSSATDDSMCLAESGLSYPCHRLTVGRRSSPAQTREQSEEQSTDVHMVSDSDGDDFEDASEFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDVKRNLNNHHWSIFVRQNKFYTNRKPQLQLRKLLAVYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDANRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEADRAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEFKLLSTFPRRDVTQLDPNKSLLENLIVPTQGSAVCQDPGDVXQQEAKQREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFSRRKVMDSDEDDDY*