Part of scaffold_17 (Scaffold)

For more information consult the page for scaffold_17 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA6 ENSTTRG00000012366 (Bottlenosed dolphin)

Gene Details

spermatogenesis associated 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011734, Bottlenosed dolphin)

Protein Percentage 77.7%
cDNA percentage 82.28%
Ka/Ks Ratio 0.46237 (Ka = 0.1704, Ks = 0.3686)

BT.42861 ENSBTAG00000003128 (Cow)

Gene Details

spermatogenesis-associated protein 6 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004068, Cow)

Protein Percentage 78.07%
cDNA percentage 81.04%
Ka/Ks Ratio 0.41282 (Ka = 0.1752, Ks = 0.4243)

SPATA6  (Minke Whale)

Gene Details

spermatogenesis associated 6

External Links

Gene match (Identifier: BACU000285, Minke Whale)

Protein Percentage 76.56%
cDNA percentage 79.86%
Ka/Ks Ratio 0.46693 (Ka = 0.1951, Ks = 0.4179)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 810 bp    Location:3181281..3258738   Strand:+
>bmy_00884
ATGGAGTTCCTTTCAGTTTGGTATAAACAAGAGGTGGGCAAGAAGGAACTTTACAGCATTGCTGAAATAGGTGATGATGGGTTCATCGGGTCTAAAGTTGAAAAATCACACGGCAGACTGCAAATCAGAACACCAAGGTCACAAAAGAAAAAATCCAAGTCACCTGAGAGAAATAAATACTGCATAAATGCAAAAAACTACGAACAGCCTACAATTTCTTCAAAATCACACTCTCCATCTCCTTACACAAAAAGACGCATGTGTGAGCTATCTGAAGACACTAGGCGGCGGCTGGCCCATTTAAATCTGGGCCCCTATGAATTCAAAAAAGAAACAGATAAACCTCCATTTGTGATTAGACATGTTGATCCCCCAAGTCCCAGGGCTGATGCTTTATTTGGATCTTCTGGCAGAGACTGTGAAAGAGATGGATGGTCCAGGCTGCACAATGATCATTCTCATCTTGGCTGCTACCGACCCAAGGATTATAAGGTCATCAGAACACCTCATGGGAGAGACTTCGATGACTCTTTGGAAAGATGTGATGACTATTTGAGTTCAAGATTCCATTCTGATTGGTGTTCACCTTCAAACTGCGATGAGATCCATGACCGGATGTTTTTATTCAGTGTAAAGTTTTATCTTGAAAGAGTGCAGGATGAGAGAGACCCAGAGAAAGAAGATGAACTGGAACTGAAAAGAGGTCTTTTATATAGAGACTCTGCCTACGACAGTGACCCAGAGTATAGAGGGCTCCCTATTCAAGTAGCAAGAAGCCATATCTTTGGTGCATCCAGAATCAGAAAATAG

Related Sequences

bmy_00884T0 Protein

Length: 270 aa      View alignments
>bmy_00884T0
MEFLSVWYKQEVGKKELYSIAEIGDDGFIGSKVEKSHGRLQIRTPRSQKKKSKSPERNKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHLNLGPYEFKKETDKPPFVIRHVDPPSPRADALFGSSGRDCERDGWSRLHNDHSHLGCYRPKDYKVIRTPHGRDFDDSLERCDDYLSSRFHSDWCSPSNCDEIHDRMFLFSVKFYLERVQDERDPEKEDELELKRGLLYRDSAYDSDPEYRGLPIQVARSHIFGASRIRK*