Sequence detailsbmy_00888 (Coding sequence)

Part of scaffold_16 (SequenceType object (1))

For more information consult the page for scaffold_16 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MID1 (Minke Whale)

Gene Details

midline 1 (Opitz/BBB syndrome)

External Links

Gene match (Identifier: BACU009372, Minke Whale)

Protein Percentage 14.58%
cDNA percentage 33.75%
Ka/Ks Ratio 0.16882 (Ka = 1.4609, Ks = 8.6536)

Additional orthologs identified in other species via the OPTIC pipeline.

MID1 (Cow)   MID1 (Human)   Mid1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 723 bp    Location:29012..14841   Strand:-
Raw sequence 
>bmy_00888
ATGCAGATCTACCCCATGCTGGCACCAAAGAACCCATCACGTCTGCTTGGCTTTGCAGGTCTGTGTAACTCGGCCGATAGCTGGATGATCGTGCCCAACATCAAGCAGAACCACTACACCGTCCACGGTCTGCAGAGCGGCACCAAGTACATCTTCATTGTCAAGGCCATCAACCAGGCGGGCAGCCGCAGCAGTGAGCCTGGGAAGTTGAAGACAAACAGCCAACCATTTAAACTGGACCCCAAATCTGCACATCGCAAGCTAAAGGTGTCCCACGATAACTTGACAGTAGAACGYGATGAGTCATCATCCAAAAAGAGCCACACGCCTGAACGCTTCACCAGCCAAGGCAGCTATGGCGTAGCTGGAAACGTGTATGCCATTGGCCTCGCTTACAAATCAGCCCCGAAGCATGAGTGGATTGGCAAGAACTCTGCTTCATGGGCGCTGTGCCGCTGCCACAATACCTGGGTGGTGAGACACAACAGCAAGGAGATCCCCATCGAGCCAGCCCCCCACCTCCGGCGCGTCGGCATCCTGCTGGACTACGATAACGGCTCCATCGCTTTCTACGATGCCTTGAACTCCATCCACCTCTACACTTTCGACATCACATTCTCGCAGCCTGTGTGCCCCACCTTCACTGTGTGGAACAAATGTCTGACCATCATAACCGGCCTCCCCATCCCAGACCATCTGGATTGCACAGAGCAGCTGCCGTGA

Related Sequences

bmy_00888T0 SequenceType object (3)

Length: 241 aa      
>bmy_00888T0
MQIYPMLAPKNPSRLLGFAGLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVYAIGLAYKSAPKHEWIGKNSASWALCRCHNTWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP*