Part of scaffold_18 (Scaffold)

For more information consult the page for scaffold_18 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NKX2-6 ENSTTRG00000012331 (Bottlenosed dolphin)

Gene Details

NK2 homeobox 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011698, Bottlenosed dolphin)

Protein Percentage 94.3%
cDNA percentage 96.31%
Ka/Ks Ratio 0.42057 (Ka = 0.03, Ks = 0.0712)

NKX2-6 ENSBTAG00000014008 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051347, Cow)

Protein Percentage 82.27%
cDNA percentage 87.4%
Ka/Ks Ratio 0.27227 (Ka = 0.0945, Ks = 0.3472)

NKX2-6  (Minke Whale)

Gene Details

NK2 homeobox 6

External Links

Gene match (Identifier: BACU001970, Minke Whale)

Protein Percentage 84.2%
cDNA percentage 88.22%
Ka/Ks Ratio 0.55619 (Ka = 0.1121, Ks = 0.2016)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1050 bp    Location:948934..952766   Strand:+
>bmy_00918
ATGGCCCAGAGGAAGGCGCAGTCCGGACGCTGGGTGTCTGTCGTAGACCTTGGGTCTGCGGAGTCTGCAGCGACAAAACGGAAAGCTCAGCGCGCTGCGCTCTGTGGGGACCGGGGACTCCCCAGCCCCGCCTCCTCCTCCTCCTTCAGGATGTTACTGAACCCTGTCACCTCCACTCCCTTTTCGGTCAATGACATCCTGAGGCTGGAGCGTGAGCAGATCGGCCCGGAGGCCTTGCAACTCCGGGGTGCACGGAGGAGCCCGGAAAGCTCTCAGTACCTGCTACCGGTCCCAGAACAGCGAGGGTCGGAGGTTCCCAGCACCGGTAGCGGCGACGGCGACAGAAGGCAGGAAAGGTCAGAGCCTCCTGAAGGTCCCTGTGAGACAGTCACAGAGATGGACGCTGAACCGGTGGGCGAGCCACAGTCCGGCCTCAGCGCAGCCTCGCCCCCCTGCGACGGGACCCGGGTGCAGGAGCGCGACGTGGGTGACAGCGGCGGCGGCGCGCGCGGGGATGGCTCGGAGCATCCCAAAGGGCGGCCCCGGCGGAAGCCGCGCGTGCTCTTCTCGCAGGCGCAGGTGCTGGCTCTGGAGCGGCGCTTCAAGCAGCAGCGGTACCTGTCGGCGCCGGAACGCGAGCACCTGGCCAGCGCGTTGCAGCTCACGTCGACGCAGGTCAAGATCTGGTTCCAGAACCGGCGCTATAAGTGCAAGAGGCAGCGCCAGGACAAGTCCCTGGAACTGGCGGGCCACCCGCTAGCGCCGCGCCGGGTGGCGGTGCCCGTGCTGGTGCGGGATGGCAAGCCCTGCCTGGGCCCCCGCACGCCCGCCTTCTCCGGCCCCTATGGCGCGGCCGCGGAGCCCTATTCCTGTTTCGGCGGCTACGCGGGCGCTGCCTACAGCGCTCCCTACGGCGGCGGCTACGCCGGCGCGCCCCCGGGCCCCGCGCCCCCCGCACCCCAGGCCAGCTCTGGCTTCAGCGGGGCGGGACCGAGCGCCAACCCGCAGGGCCATCTGCCCGCCACGCTTCAGGGGGTCAGGGCCTGGTGA

Related Sequences

bmy_00918T0 Protein

Length: 350 aa      View alignments
>bmy_00918T0
MAQRKAQSGRWVSVVDLGSAESAATKRKAQRAALCGDRGLPSPASSSSFRMLLNPVTSTPFSVNDILRLEREQIGPEALQLRGARRSPESSQYLLPVPEQRGSEVPSTGSGDGDRRQERSEPPEGPCETVTEMDAEPVGEPQSGLSAASPPCDGTRVQERDVGDSGGGARGDGSEHPKGRPRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQRQDKSLELAGHPLAPRRVAVPVLVRDGKPCLGPRTPAFSGPYGAAAEPYSCFGGYAGAAYSAPYGGGYAGAPPGPAPPAPQASSGFSGAGPSANPQGHLPATLQGVRAW*