Part of scaffold_18 (Scaffold)

For more information consult the page for scaffold_18 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NKX3-1 ENSTTRG00000012332 (Bottlenosed dolphin)

Gene Details

NK3 homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011699, Bottlenosed dolphin)

Protein Percentage 94.7%
cDNA percentage 96.97%
Ka/Ks Ratio 0.46327 (Ka = 0.0243, Ks = 0.0525)

NKX3-1 ENSBTAG00000001221 (Cow)

Gene Details

homeobox protein Nkx-3.1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001615, Cow)

Protein Percentage 83.97%
cDNA percentage 88.75%
Ka/Ks Ratio 0.22573 (Ka = 0.0767, Ks = 0.3397)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 732 bp    Location:975468..977417   Strand:+
>bmy_00919
ATGCTTCGGACTCCTGAGCCGCGGCCTGGGGAGGGGGGGGCAGCTAGCTGCAGCCCCCGGGCCGCGCCGCCCACCCAGTCCAAGCCGCTCACCTCCTTCCTCATCCAGGACATCCTGCGGGAAGGCGCTGATCGGCGCGGAGGTCACGCGGGCAGCCCGCAGCCCCCGCCGCAGCCCCCGCCGCAGCCCCCGCGCCAGCCTGACCGGAGGCGAGACCCTGAGCCGGAGCCCGAGGGAGGAAGAGGCGGCGCCGGGGCGCCGGAGGACCAGCCGAGAGCCCGGCCCCGCGCTGCGCGCGGGGAGGCCGAGCAGCCGGCGGAGACCGAGCCAGATAGGCACTTTGAGGCTTATCTGTTGGACGCCTTACCGAGCCTGCCCCCAGCCCCCAAGCAGCCACAGAAGCGCTCCCGGGCGGCCTTCTCGCACACTCAGGTCATTGAGTTGGAGAGGAAGTTCAGTCACCAGAAGTATCTTTCAGCTCCTGAAAGGGCTCACCTGGCCAAGAATCTCAAGCTCACGGAGACCCAAGTGAAAATATGGTTCCAGAACAGACGCTATAAGACCAAGCGGAAGCAGCTCACCTCAGACCTGGGAGACCTGGAGAAGCATCCTTCCTTGCCAGCTCTGAAAGAGGAGGGCTTCTCGCGGGGCTCCCTCATCTCCATGCATAACACCTGCCCTTACTACCCCTACCTTTACTGCTTGGCAGGCTGGAGCCCAGCTTTCTGGTAA

Related Sequences

bmy_00919T0 Protein

Length: 244 aa      View alignments
>bmy_00919T0
MLRTPEPRPGEGGAASCSPRAAPPTQSKPLTSFLIQDILREGADRRGGHAGSPQPPPQPPPQPPRQPDRRRDPEPEPEGGRGGAGAPEDQPRARPRAARGEAEQPAETEPDRHFEAYLLDALPSLPPAPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGDLEKHPSLPALKEEGFSRGSLISMHNTCPYYPYLYCLAGWSPAFW*