Sequence detailsbmy_00951 (Coding sequence)

Part of scaffold_18 (SequenceType object (1))

For more information consult the page for scaffold_18 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SFTPCENSTTRG00000012067 (Bottlenosed dolphin)

Gene Details

surfactant protein C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011438, Bottlenosed dolphin)

Protein Percentage 71.33%
cDNA percentage 79.33%
Ka/Ks Ratio 0.66047 (Ka = 0.2269, Ks = 0.3435)

SFTPCENSBTAG00000012560 (Cow)

Gene Details

Pulmonary surfactant-associated protein C

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016672, Cow)

Protein Percentage 72.19%
cDNA percentage 79.91%
Ka/Ks Ratio 0.46823 (Ka = 0.1954, Ks = 0.4173)

Additional orthologs identified in other species via the OPTIC pipeline.

SFTPC (Human)   Sftpc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 507 bp    Location:2344527..2341980   Strand:-
Raw sequence 
>bmy_00951
ATGGATGTGGGCAGCAAAGAGGTCTTGATGGAGAGCCCGCCGAAAGGGTATCCTCATGACCTCACACCTGTCTCCCTCCCTGCCCCACCACGTCAGGACTACTCAGCAGTCCCTGGGGGCCGGTTCCAAATCCCCTGCTGTCCTGTGAACATCAAACGCCTTCTCATCGTGGTCGTGGTGGTGGTCCTTGTTGTCGTGGTGATTGTAGGGGCCCTGCTCATGGGTCTTCACATGAGCCAGAAACATACTGAGATGGTCCTAGAGATGAGCATCGCGGGGCCGGAAGCCCAGCAACGCCTGGCCCTGAGTGAGCGTGTGGGAACCACTGCCACCTTCTCCGTTGGCTCCACTGGCATCGTGGCATATGACTACCAGAGGGTGGGGCCTCAGCAAGCCCCAAAGGGACAGCAAAGCTCCAGGAGCAAAGGGTCTTGTGCAGACAGGCAGGAAGCCGCTCCTGCCAATACCACTGGGACTGGTCCTGGAGAAATGGGAGCTGTGGGGAGA

Related Sequences

bmy_00951T0 SequenceType object (3)

Length: 169 aa      View alignments
>bmy_00951T0
MDVGSKEVLMESPPKGYPHDLTPVSLPAPPRQDYSAVPGGRFQIPCCPVNIKRLLIVVVVVVLVVVVIVGALLMGLHMSQKHTEMVLEMSIAGPEAQQRLALSERVGTTATFSVGSTGIVAYDYQRVGPQQAPKGQQSSRSKGSCADRQEAAPANTTGTGPGEMGAVGR