Sequence detailsbmy_00966 (Coding sequence)

Part of scaffold_19 (SequenceType object (1))

For more information consult the page for scaffold_19 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APOBEC3Z3ENSBTAG00000007755 (Cow)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003115, Cow)

Protein Percentage 66.02%
cDNA percentage 79.11%
Ka/Ks Ratio 0.50304 (Ka = 0.22, Ks = 0.4374)

Additional orthologs identified in other species via the OPTIC pipeline.

APOBEC3H (Human)   Apobec3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1131 bp    Location:35824..46821   Strand:+
Raw sequence 
>bmy_00966
ATGGAGCCCCAGCGCCCGAGACAAAGGGCAGGGCTGGGACTAGCCAGCAAAGGAGGCTGCAGCCAGAGGCCCCGGATCAGAAACCCAGTGGAGTGGTTAGATCGCCAAACCTTCTCCTTCCACTTTCGCAACCTGAGCTTTGCCAATGGGCGGAACTGCTCCTACCTCTGCTACCAGGTCTATCCCGAGACTCCCTGCCACGCGGAACTCTGCTTCCTCTCTTGGTTTTGCGCCAAGAAGCTGTCCCCTTACGAGCAGTACGATATCACCTGGTTCTTATCCTGGAGCCCCTGCTTGTCATGTGCAGAGCAGGTGGCTGCGTTCCTGAAGGAGAACAGGAACGTGAGGCTGAGCATCTTCGCCGCCCGCCTCTACTACTTCTGGAAACCAGAGTGCCAGCACGGGCTGCGCCTGCTGCACCACCAGAGGGCCTGGGTGCGCATCATGTCCATCCGAGAGTTTAAATACTGTTGGAAAAACTTTGTGTACRATCAGGGAATGCCCTTCAAGCCTTGGAAGAAACTGCGTAAAAATTATCAGTTCCTGGCGGCAAAGCTTCAGGAAATTCTCGGAAACACAATGAATCTGCTAAAAAAAAAAGTATTCCAACAACAGTTTGGCAACCAGCACTGGGTCCCACTGCCCCGCTACCGGAGGAAGACCTATTTGTGCTACCAGCTGAAGCAGCTCGATGGCTTCACGCTTGACAAAGGCTGCTTCCGAAACAAGGTGCCAAACCCTCTCCAGAAACAGCGACATGCAGAAATTCGCTTTATTGACAAGATCACCTCGCTGAATCTCGACCCAAACCAGAGCTACAAAATCATCTGCTATGTCACGTGGAGCCCTTGCCCTACCTGTGCCAGGGAACTGGTTGATTTCATCAACGGTCAGGACCACCTGAGCCTGCAGATCTTTGCCTCCCGCCTGTACTTCCACTGGGTCAAGCTGTTTCAGAGGGGGCTGCAGCAGCTACAGGCAGCCCAGGTCTCAGTGGCTGTCATGACCCGCTCAGAGTTTGAAGACTGCTGGGAAGAATTTGTGGATAACCAGGGGATGCCCTTCGAGTCCTGGGATAAGCTGGAGCAGTACAGTGAAAGCATAAGCCGTCGGCTCCAGAAGATCCTGCTG

Related Sequences

bmy_00966T0 SequenceType object (3)

Length: 377 aa      View alignments
>bmy_00966T0
MEPQRPRQRAGLGLASKGGCSQRPRIRNPVEWLDRQTFSFHFRNLSFANGRNCSYLCYQVYPETPCHAELCFLSWFCAKKLSPYEQYDITWFLSWSPCLSCAEQVAAFLKENRNVRLSIFAARLYYFWKPECQHGLRLLHHQRAWVRIMSIREFKYCWKNFVYBQGMPFKPWKKLRKNYQFLAAKLQEILGNTMNLLKKKVFQQQFGNQHWVPLPRYRRKTYLCYQLKQLDGFTLDKGCFRNKVPNPLQKQRHAEIRFIDKITSLNLDPNQSYKIICYVTWSPCPTCARELVDFINGQDHLSLQIFASRLYFHWVKLFQRGLQQLQAAQVSVAVMTRSEFEDCWEEFVDNQGMPFESWDKLEQYSESISRRLQKILL