Part of scaffold_19 (Scaffold)

For more information consult the page for scaffold_19 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MCHR1 ENSTTRG00000011505 (Bottlenosed dolphin)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010910, Bottlenosed dolphin)

Protein Percentage 95.66%
cDNA percentage 96.22%
Ka/Ks Ratio 0.2104 (Ka = 0.0236, Ks = 0.1124)

BT.37989 ENSBTAG00000004048 (Cow)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037483, Cow)

Protein Percentage 97.45%
cDNA percentage 95.28%
Ka/Ks Ratio 0.03745 (Ka = 0.0115, Ks = 0.3081)

MCHR1  (Minke Whale)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene match (Identifier: BACU013396, Minke Whale)

Protein Percentage 99.72%
cDNA percentage 99.34%
Ka/Ks Ratio 0.03754 (Ka = 0.0011, Ks = 0.0305)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1344 bp    Location:1419978..1422585   Strand:+
>bmy_00988
ATGGGGATGCCTGAGCCCGGCTCCGGCCGCTGGGCTCTGCAGGCAGTCGGAAGCTGGAGCTGCTGCGGCGCAGGACCGAAGAGGTTAATGCGCATCTGCCTCCGAATGTTAATGTGTCTAGGTGATGTCAGTGGGAGCCGGGGAAGGAGTGAGGGGAGAGCGGAAGACCCCCCTCCAGACGGCGGGGCTCCGGGGGGCCGGGGCTCGGGACGCAGCGGTCGGCGCGGGAGGCTGCCGCAGCCTGCGTGGGCCGACGGGCGGGCGGGCGCCGGCGCCGGCGGGATGGACCTGGAAGCCTCGCTGCTGCCCACCGGCCCCAATGCCAGCAACACCTCGGATGGCCCGGATAACCTCACCACGGCCGGGCTGCCGCCTCGCACAGGGAGCGTCTCTTACATCAACATCATCATGCCTTCGGTGTTCGGTACCATCTGCCTCCTGGGCATCATTGGGAACTCCGTGGTCATCTTCGCGGTGGTGAAGAAATCCAAGCTGCACTGGTTCAGCAACGTCCCYGACATCTTCATCATCAACCTCTCGGTGGTGGACCTCCTCTTTCTCCTGGGCATGCCCTTCATGATCCACCAGCTCATGGGCAATGGTGTCTGGCACTTTGGAGAGACCATGTGCACCCTCATCACGGCCATGGACGCCAACAGTCAGTTCACCAGCACCTACATCCTGACCGCCATGGCCATTGACCGCTACCTGGCCACCGTCCACCCCATCTCCTCCACCAAGTTCCGGAAGCCCTCTGTGGCCACCCTGGTGATCTGCCTCCTGTGGGCCCTGTCCTTCATCAGCATCACCCCCGTGTGGCTCTACGCCAGGCTTATCCCCTTCCCAGGAGGCACCGTGGGCTGTGGCATCCGCCTGCCCAACCCAGACACTGACCTCTACTGGTTCACCCTGTACCAGTTTTTCCTGGCCTTTGCCCTGCCCTTCGTGGTCATCACGGCCGCGTATGTGAGGATCCTGCAGCGCATGACATCCTCCGTGGCCCCCGCCTCTCAACGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACGGCCATCGCTATCTGCCTGGTTTTCTTTGTGTGCTGGGCGCCCTACTACGTGCTTCAGCTGACCCAGCTGTCCATCAGCCGCCCGACGCTCACCTTTGTCTACCTGTACAACGCGGCCATCAGCTTGGGCTATGCCAACAGCTGCCTCAACCCCTTTGTGTACATCGTGCTCTGTGAGACATTCCGAAAACGCTTGGTCCTATCGGTGAAGCCTGCGGCCCAGGGGCAGCTTCGAGCCATCAGCAATGCCCAGACGGCTGATGAAGAGAGGACAGAAAGCAAGGGCACCTGA

Related Sequences

bmy_00988T0 Protein

Length: 448 aa      View alignments
>bmy_00988T0
MGMPEPGSGRWALQAVGSWSCCGAGPKRLMRICLRMLMCLGDVSGSRGRSEGRAEDPPPDGGAPGGRGSGRSGRRGRLPQPAWADGRAGAGAGGMDLEASLLPTGPNASNTSDGPDNLTTAGLPPRTGSVSYINIIMPSVFGTICLLGIIGNSVVIFAVVKKSKLHWFSNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGTVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAISNAQTADEERTESKGT*