Part of scaffold_19 (Scaffold)

For more information consult the page for scaffold_19 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SREBF2 ENSTTRG00000017350 (Bottlenosed dolphin)

Gene Details

sterol regulatory element binding transcription factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016443, Bottlenosed dolphin)

Protein Percentage 90.67%
cDNA percentage 90.9%
Ka/Ks Ratio 0.22011 (Ka = 0.013, Ks = 0.0593)

SREBF2 ENSBTAG00000014265 (Cow)

Gene Details

sterol regulatory element-binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018956, Cow)

Protein Percentage 93.76%
cDNA percentage 91.57%
Ka/Ks Ratio 0.08421 (Ka = 0.0302, Ks = 0.3582)

SREBF2  (Minke Whale)

Gene Details

sterol regulatory element binding transcription factor 2

External Links

Gene match (Identifier: BACU013419, Minke Whale)

Protein Percentage 98.41%
cDNA percentage 98.79%
Ka/Ks Ratio 0.35777 (Ka = 0.0086, Ks = 0.0241)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2649 bp    Location:2351955..2390418   Strand:+
>bmy_01016
ATGCTGCAGTTTGTCAGCAATCAAGTGGGAGAGTTCCCTGACTTGTTCTCAGAGCAGCTGTGCAGCTCCTTCCCTGGCGGCGGTGGAAGTGGCAACAGCGGCAGCAGCAATGGCGGCAGCAGCGGTGGCGGAGCCGGAGCCGGGGACCCCTCGTTGCAGCGGTCCTTCAGCCAGGTCCCGTTACCTTCCTTCTCGCCCTCGGCTACCTCCCCCCAGGCTCCAGCCCTACAAGTCAAGGCTCCCCCCACCGCAGTTCCCCCTCCGCCAAGGGCAACTCCCGTTCTTCAGCCCCGCCCCCAGCCCCAGCCCCAGCCTCCAGCTCAGCTGCAGCAGCAGACAGTAATGATCACCCCGACATTCAGCACCGCTCCCCAGACGAGGATCATCCAGCAGCCTTTGATATACCAGAATGCAGCTACCAGCTTTCAAGTCCTTCAGCCTCAAGTCCAAAGCCTAGTGGCATCCTCCCAGGTGCAGCCGGTCACCATCCAGCAGCAGGTGCAGACGGTGCAGGCCCAGCGGGTGCTGACGCAGACGGCCAATGGCACGCTGCAGACCCTCGCCCCGGCCACGGTGCAGGCAGTTGCTGCGCCCCAGGTGCAGCAGGTCCCGGTCCTGGTACAGCCTCAGATCATCAAGACAGATTCCCTTGTTTTGACCACACTGAAGACAGATGGCAGCCCTGTGATGGCCGCAGTCCAGAACCCAGCCCTCACTGCCCTCACCACCCCCATCCAGACAGCTGCCCTTCAAGTTCCGACCCTGGTGGGCAGCAATGGGACCATTCTGACCACAATGCCTGTGATGATGGGACAAGAGAAAGTGCCCATTAAGCAGGTACCTGGGGGAGTCAAGCAGCTCGAGCCCCCCAAGGAAGGAGAAAGGCGGACGACACACAACATCATTGAGAAGCGGTATCGCTCCTCCATCAATGACAAAATCATTGAGTTGAAGGACCTGGTCATGGGGACAGATGCCAAGATGCACAAGTCTGGCGTTCTGAGGAAGGCCATTGACTACATCAAATACTTGCAGCAGGTCAATCATAAACTGCGCCAGGAGAACATGGTGCTGAAACTAGCAAATCAGAAGAACAAGCTCTTGAAGGGCATTGACCTAGGCAGCCTGGTGGACAATGACGTGGACCTGAAGATCGATGACTTTAATCAGAATGTCCTTCTGATGTCGCCTCCGGCCTCCGACTCAGGGTCCCAGGCAGGCTTCTCCCCCTACTCCATCGACTCTGAGCCAGGAAGCCCTCTATTGGATGATGCAAAGGTCAAAGATGAGCCAGACTCTCCTCCTGTAGCCCTTGGCATGGTGGACCGCTCACGAATCCTGCTGTGTGTCCTCACCTTCCTGTGCCTCTCCTTTAACCCCCTGACCGCCCTGCTGCAATGGGGAGGGGCCCACGACTCGGACCAGCATCCACACTCAGGCTCTGGCCGCAGCATGCTGTCACTCGAGTCAGGCTCTGGGGGCTGGCTGGGCTGGATGATGCCGACGCTCCTCCTGTGGCTGGTGAACGGTGTGATTGTCCTGAGCGTCTTCGTGAAGCTGCTGGTCCATGGGGAGCCAGTGGTCCGGCCGCATTCGCGCTCCTCGGTCACCTTCTGGAGGCACCGGAAGCAGGCAGACCTGGACCTGGCCCGGGGGGATTTTGCAGCTGCCGCTGCCAACCTGCAAACCTGCCTGTCGGTGTTGGGCCGGGCACTGCCCACCTCCCGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCGCTACAGCCTGCAGAAGCTGCGCCTGGTGCGCTGGCTGCTCAAGAAGGTCTTCCAGCGCCGGCGGGCCACCCTGGCCGCCGCCGCAGGCTTTGAGGAGGAAGCTAAGACCAGCGCCCGGGATGCAGCCCTGGCCTATCACAGGCTGCACCAGCTGCACATCACAGGCAAGCTTCCTGTGGGATCCGCCTGTTCAGATGTACACATGGCTTTGTGCGCTGTGAACCTGGCTGAATGTGCAGAGGAGAAAATCCCCCCGAGCACGCTGGTTGAGATCCATCTCACGGCCGCCATGGGGCTCAAGACCCGGTGTGGAGGCAAGCTGGGCTTCCTGGCGAGCTACTTCCTCAGTCGCGCCCAGAGCCTGTGTGGCCCCGAGCGCAGCGCTGTTCCCGACTCGCTGCGCTGGCTCTGCCACCCCCTGGGCCAGAAGTTTTTCATGGAGCGGAGCTGGTCCGTGAAGTCGGCTGCCAAGGAGAGTCTGTACTGCGCCCAGAGGAACCCAGCTGACCCCATCGCCCAGGTGCACCAGGCCTTCTGCAGGAACCTGCTGGAGCGAGCTGTGGAGTCCTTGGTGAAACCTCAGGCCAAGAAGAAAGCTGCAGACCAGGAAGAGGAGAGCAGTGAATTCTCCAGTGCTCTGGAGTACCTGAAATTACTTAATTCTTTTGTGGACTCTGTGGGGATTGTGACCGCCCCCTTCTCCAGCAGCTGCGTGCTCAAGTCAGCCCTTGGCCCAGACGTTGTCTGTCGGTGGTGGACGTCCGCGATCACCATGGCCATCAGCTGGCTCCAGGGAGACGACGCAGCTGTGCGCGCTCACTGTACCGAAGTGGAGCGTGTTCCCAAGGCCCTGGAAGTGACAGAATGGCAGCATTTGGTTTAA

Related Sequences

bmy_01016T0 Protein

Length: 883 aa      View alignments
>bmy_01016T0
MLQFVSNQVGEFPDLFSEQLCSSFPGGGGSGNSGSSNGGSSGGGAGAGDPSLQRSFSQVPLPSFSPSATSPQAPALQVKAPPTAVPPPPRATPVLQPRPQPQPQPPAQLQQQTVMITPTFSTAPQTRIIQQPLIYQNAATSFQVLQPQVQSLVASSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQAVAAPQVQQVPVLVQPQIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSNGTILTTMPVMMGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDNDVDLKIDDFNQNVLLMSPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCLSFNPLTALLQWGGAHDSDQHPHSGSGRSMLSLESGSGGWLGWMMPTLLLWLVNGVIVLSVFVKLLVHGEPVVRPHSRSSVTFWRHRKQADLDLARGDFAAAAANLQTCLSVLGRALPTSRLDLACSLSWNVIRYSLQKLRLVRWLLKKVFQRRRATLAAAAGFEEEAKTSARDAALAYHRLHQLHITGKLPVGSACSDVHMALCAVNLAECAEEKIPPSTLVEIHLTAAMGLKTRCGGKLGFLASYFLSRAQSLCGPERSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQRNPADPIAQVHQAFCRNLLERAVESLVKPQAKKKAADQEEESSEFSSALEYLKLLNSFVDSVGIVTAPFSSSCVLKSALGPDVVCRWWTSAITMAISWLQGDDAAVRAHCTEVERVPKALEVTEWQHLV*