Part of scaffold_19 (Scaffold)

For more information consult the page for scaffold_19 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHISA6 ENSTTRG00000012300 (Bottlenosed dolphin)

Gene Details

shisa homolog 6 (Xenopus laevis)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011668, Bottlenosed dolphin)

Protein Percentage 15.56%
cDNA percentage 34.77%
Ka/Ks Ratio 0.1857 (Ka = 1.5189, Ks = 8.1795)

BT.86404 ENSBTAG00000046399 (Cow)

Gene Details

protein shisa-9 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054165, Cow)

Protein Percentage 16.52%
cDNA percentage 38.55%
Ka/Ks Ratio 0.09636 (Ka = 1.4078, Ks = 14.6095)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 933 bp    Location:2398346..2393530   Strand:-
>bmy_01017
ATGGGGCAGTGGGACCCGCCCTTCAACTGCAGCTCGGGCGCCTACAACTTCTGCTGCGGCACGTGCGGCTACCGCTTCTGCTGCCACGACGGGCCGCGGCGCCTTGACCAGAGCCGCTGCTCCAACTACGACACGCCGGCCTGGGTTCAGACTGGCCGGCCTCCCGCGCGTGCCCGCGACGCCACGGTGCCCCGGGACCCGGGCCGCGAACGCAGCCACACGGCCGTCTACGCGGTGTGCGGCGTCGCCGCCCTGTTCGTGCTGGCCGGCATCGGGGCGCGCCTGGGCCTGGAGAGGGCGCACAGCCCGCGCGCGCGGCGCACCGTGACCAGCTGTGTCCAGGTGCAGATGGGCGATGGCCTCCCCCAGGGCTCCCTCCACAACAGCACAGACAAGAAACGCCCCATCAACGTGCCCCTGGCTTCGGCGACAGCGGGCCCCCCGCGCGCCCCGCGGCTGCAGGGCGGCGACAGCCTGACGAGGCAGCCGGACTACGCCAAGTACGCCACCCTCAAGGCAGCCGCGCTCAAGGCCGCAGAGGCCTCCCCGCGGGACTTCTACCAGCGTTTTCCCGCGACTGAAGCAGCCCCGCCGACCCTCCCGGCGCGAGCCCGGAGGCCCCCCGAGGACTTGCCTGCACTGCTCGACGCCTGCCCCTGGACCCCGCCGGGCTACGCGCCCCCCGCCGGCCCCACCCTATCGGGCCACTACAAGGCCTGGACGGCCGGCCGCCCGGCCCAGCCCGCCCCCCGCGGCCACCTGGCGTCTCATGCCTCCTCAGCGCCCCGGAGGCCCGGCGACGCACCCCGGCGCCAGTTCAGCGTGGAGAAGCTGCCCGAGGCCTTCAGCCCTCAGCCCCCTGGCCTTTATGGCCGCGCCAGCCGTGGACCCCGGCACCTGAGCACCAACAGCAAAGCCGAGGTCACCGTGTGA

Related Sequences

bmy_01017T0 Protein

Length: 311 aa      View alignments
>bmy_01017T0
MGQWDPPFNCSSGAYNFCCGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARARDATVPRDPGRERSHTAVYAVCGVAALFVLAGIGARLGLERAHSPRARRTVTSCVQVQMGDGLPQGSLHNSTDKKRPINVPLASATAGPPRAPRLQGGDSLTRQPDYAKYATLKAAALKAAEASPRDFYQRFPATEAAPPTLPARARRPPEDLPALLDACPWTPPGYAPPAGPTLSGHYKAWTAGRPAQPAPRGHLASHASSAPRRPGDAPRRQFSVEKLPEAFSPQPPGLYGRASRGPRHLSTNSKAEVTV*