Sequence detailsbmy_01024 (Coding sequence)

Part of scaffold_19 (SequenceType object (1))

For more information consult the page for scaffold_19 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NAGAENSTTRG00000017362 (Bottlenosed dolphin)

Gene Details

N-acetylgalactosaminidase, alpha-

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016455, Bottlenosed dolphin)

Protein Percentage 96.07%
cDNA percentage 97.82%
Ka/Ks Ratio 0.36973 (Ka = 0.0166, Ks = 0.0448)

NAGAENSBTAG00000009506 (Cow)

Gene Details

alpha-N-acetylgalactosaminidase precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012508, Cow)

Protein Percentage 92.71%
cDNA percentage 93.06%
Ka/Ks Ratio 0.12478 (Ka = 0.0357, Ks = 0.2858)

NAGA (Minke Whale)

Gene Details

N-acetylgalactosaminidase, alpha-

External Links

Gene match (Identifier: BACU013426, Minke Whale)

Protein Percentage 98.18%
cDNA percentage 98.96%
Ka/Ks Ratio 0.4395 (Ka = 0.0078, Ks = 0.0178)

Additional orthologs identified in other species via the OPTIC pipeline.

NAGA (Human)   Naga (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1188 bp    Location:2533834..2524868   Strand:-
Raw sequence 
>bmy_01024
ATGGGCTGGCTGGCCTGGGAACGCTTCCGCTGCAACACTGACTGTAACGAGGACCCAAAGAACTGCATCAGTGAGCGGCTCTTCATGGAGATGGCTGACCGGCTGGCACAGGATGGATGGCGGGACCTGGGCTACGTATACCTTAACATCGATGACTGCTGGATTGGTGGACGTGATGCCAAAGGCAACCTGGTGCCTGATCCCAAGCGCTTCCCCAACGGCATGGCCTTCCTGGCTGACTATGCTCATTCCCTGGGCCTGAAGCTGGGCATCTACGAGGACATGGGCATCTTCACCTGCATGGGTTACCCAGGCACCACGCTAGACAAGGTGGTCCAGGATGCTCAAACCTTCGCCAAGTGGAAGGTGGACATGCTGAAGCTGGATGGCTGCTTCTCAACCCCCGAGGAACGGGCYGAGGGGTACCCCAAGATGGCTGCTGCCCTGAATGCCACAGGCCGCCCCATCGCCTTCTCCTGCAGTTGGCCAGCCTACGAAGGGGGCCTCCCCCCAGAGGTGAACTACACTCTGCTGGCGGACATCTGCAACCTCTGGCGCAACTATGACGACATCCAGGACTCCTGGAGGAGCGTGCTCTCCATCCTGGACTGGTTTGTGACCCACCAGGACATTCTGCAGCCGGTGGCAGGCCCTGGGCACTGGAACGACCCAGACATGTTGCTCATTGGGAACTTTGGCCTCAGCTTCGAGCAAGCCCGGGCCCAGATGGCCCTGTGGACGGTGCTGGCGGCCCCCCTCTTCATGTCCACGGACCTGCGTACCATCTCCGCCCAGAACGTGGACATTCTGCAGAATCCACTCATGATCAAGATCAACCAGGATCCCTTAGGCATCCAAGGACGCAGGATTCTCAAGGGACCCCAGCCAGTAGCCATCTTCTGCGCCCAGGAGAAATCCCACATTGAAGTGTACGTGCGGCCCCTGGCCAATGAGGCCAGCGCCATAGTCTTCTTCAGCCGCAGGACAGATATGCCGTATCGCTACCGGGCCTCCCTCGCCCGGCTGAACTTCTCCAGCTCCAAGGTGTATGAGGCCCAGAACGTCTACACGGGTGACATCATCAGTGGCCTCCAGGATAAAACCAACTTCACATTGATCATCAACCCTTCCGGGGTGGTGATGTGGTACCTGTATCCTATCAGGAAGCTGGGGACGCCCCAGCAGTGA

Related Sequences

bmy_01024T0 SequenceType object (3)

Length: 396 aa      View alignments
>bmy_01024T0
MGWLAWERFRCNTDCNEDPKNCISERLFMEMADRLAQDGWRDLGYVYLNIDDCWIGGRDAKGNLVPDPKRFPNGMAFLADYAHSLGLKLGIYEDMGIFTCMGYPGTTLDKVVQDAQTFAKWKVDMLKLDGCFSTPEERAEGYPKMAAALNATGRPIAFSCSWPAYEGGLPPEVNYTLLADICNLWRNYDDIQDSWRSVLSILDWFVTHQDILQPVAGPGHWNDPDMLLIGNFGLSFEQARAQMALWTVLAAPLFMSTDLRTISAQNVDILQNPLMIKINQDPLGIQGRRILKGPQPVAIFCAQEKSHIEVYVRPLANEASAIVFFSRRTDMPYRYRASLARLNFSSSKVYEAQNVYTGDIISGLQDKTNFTLIINPSGVVMWYLYPIRKLGTPQQ*