Part of scaffold_19 (Scaffold)

For more information consult the page for scaffold_19 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCF20 ENSTTRG00000005304 (Bottlenosed dolphin)

Gene Details

transcription factor 20 (AR1)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005001, Bottlenosed dolphin)

Protein Percentage 98.47%
cDNA percentage 97.98%
Ka/Ks Ratio 0.17935 (Ka = 0.0092, Ks = 0.0515)

TCF20 ENSBTAG00000000662 (Cow)

Gene Details

transcription factor 20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000872, Cow)

Protein Percentage 94.07%
cDNA percentage 90.7%
Ka/Ks Ratio 0.09417 (Ka = 0.0308, Ks = 0.3275)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5748 bp    Location:2648589..2642842   Strand:-
>bmy_01030
ATGCAGTCCTTCCGGGAGCAAAGCAGTTACCACGGAAACCAGCAGAGCTACCCACAAGAGGTACACGGCTCATCCCGGATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGTGCAGGTGGCGGTAGTGGTGGCAGTGGCGGCAGCAGTGGTGGTGGACGACGAGGAACAGCGGCTGCTGCTGCAGCAGCGGCAATGGCTAGCGAAACCTCCGGCCATCAGGGCTACCAGGGTTTCAGGAAAGAGGCTGGAGACTTTTACTACATGGCAGGCAGCAAAGACCCCGTGGCAGCCGGAACCCCGCAGCCTGCTCAGCGAAGGCCTTCTGGGCCTGTGCAGAGCTATGGACCCCCCCAGGGGAGCAGCTTTGGCAATCAGTATGGCAGTGAGGGTCATGTGGGCCAGTTTCAAGCACAGCACTCTGCCCTTGGTGGCGTGTCTCATTATCAGCAGGATTACACGGGACCTTTCTCTCCAGGGAGCGCTCAGTACCAGCAGCAGCCTTCCAGCCAACAGCAGCAGCAAGTGCAGCAGTTGAGACAGCAGCTTTACCAGTCCCATCAGCCTCTGCCGCAGGCCACTGGGCAGCCAGCGTCTGGCTCATCCCACATGCAGCCGATGCAGCGGCCCTCAACTCTGCCAGCCTCTGCCACTGGTTACCAGTTAAGAGTGGGTCAGTTTGGCCAACACTACCAGTCTTCTGCCGCGACCTCCTCCTCCTCCTTCCCKTCGCCACAACGTTTCAGCCAGTCTGGACAGAGCTATGACGGCAGTTACAGTGTGAATGCTGGATCCCAGTACGAAGGACATAATGTGGGTTCTAATGCACAGGCTTATGGAACACAATCGAATTACAGCTATCAGCCTCAATCTATGAAGAATTTTGAACAGACGAAGATTCCACAAGGGACCCAGCAGGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCCCCCGCCTCCTCAGCACGTGATGCAGTATACCAACACTGCCACCAAGCTGCCGCTGCAAAGCCAGGTGGGGCAGTACAGCCAGCCCGAGGTTCCTGTGAGGTCCCCCATGCAGTTTCACCAGAACTTCAGCCCCATTTCTAACCCTTCCCCGGCTGCCTCTGTGGTTCAGTCTCCAAGCTGTAGCTCTACCCCGTCTCCTCTTATGCAGAGTGGGGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCGATGGGTTCCAGAAACAGAATTCTACAGTTAATGCCTCAACTCAGCCCAACCCCATCAATGATGCCCAGTCCTAATTCTCATGCTGCAGGCTTCAAAGGGTTTGGACTAGAAGGGGTGCCAGAAAAGCGGCTGACAGATCCTGGGTTGAGTAGTTTGAGTGCCCTGAGTACGCAAGTGGCCAATCTTCCTAATACTGTTCAACACATGCTACTTTCCGATGCCCTGACACCTCAGAAGAAGACCTCCAAGAGGCCGTCTTCATCTTCTAAGAAAGCAGACAGCTGCACAAACTCCGAAGGCTCCTCACAGGCTGAAGAACAACTGAAGTCCCCTCTGGCAGAGTCGCTGGATGGAGGCTGCTCCAGCAGTTCCGAGGACCCAGGTGAGAGAGTGAGGCAGCTGAGTGGCCAGAGCACCAGTTCTGACACCACCTACAAGGGTGGAGCCTCAGAGAAAGCAGGCTCCTCACCAGCACAAGTCACTCAGAATGAAGCCCCCAGACTCAGTGCCAGTCCTGTAGCCAGAGAAGAGACCGCCTCGCCAGGTGCTAAGGACATGCCATTGTCATCCGAGGGCAACCCAAAAGTCAGTGAGAAGACAGTTGGGGTGATTGTCTCCCGGGAAGCTATGACAAGTCGGGTAGAAAAACCTGGTGGGCAAGAAAAAGGCTCCCAAGAGGATGATCCTGCAGCCACTCAAAGGCCACCCAGCACTGGCGGGGCAAAGGAAACCAGTCATGCGTCACTTCCACAGCCAGAGCCTCTGGGAGGAGGAAATAAAGGAAACAAAAATGGAGATAATAACTCCAACCACAATGGAGAAGGAAACGGCCAGAGCGGGCACTCCACAGGGGGCTCTGGTTTTATAGGCAGAACTGAGCCTAGCAAATCTCCTGGAAGCTTGCGCTATAGTTACAAAGATAGCTTTGGGCCAGCCGTGCCAAGAAATGTCAGTGGCTTTCCTCAATTTCCTACAGGACAAGATAAGGGGGACTTCACTGGCCATGGGGAGCGAAAGGGTAGGAATGAGAAGTTCCCTAGCCTCCTGCAGGAAGTGCTTCAGGGTTACCACCACCACCCTGACAGGAGATATTCTAGGAGTACTCAGGAGCACCAGGGCATGGCTGGTGGCCTAGAAGGAGCCACAAGGCCTAATGTGTTAGTTAGTCAAACCAATGAATTAGCTAGCAGGGGCCTTTTGAACAAAAGCATTGGTTCCCTATTAGAAAATCCCCACTGGGGCCCCTGGGAAAGGAAATCAAGTGGCTCGGCTCCTGAAATGAAACAGATCAATTTGGCTGACTATCCAATTCCCAGAAAGTTCGAAATAGAGCCTCAGTCATCAGCCCATGAGCCCGGGGGTTCCCTCTCTGAAAGAAGATCAGTGATCTGTGATATTTCTCCACTAAGACAGATTGTCAGAGACCCGGGGGCTCACTCACTGGGACACATGGGTGCCGACACCAGACTTGGGAGGAATGAACGTCTCAATCCAAGTTTAAGTCAGTCGGTCATTCTTCCAGGTGGGTTGGTGTCCATGGAAACAAAGCTGAAATCGCAGAGTGGGCAGATAAAAGAGGAAGACTTTGAACAATCCAAGTCCCAAGCTAGTTTCAACAACAAGAAATCTGGAGACCACTGCCACCCTACTAGCATCAAGCATGAGTCTTACCGAGGCAACGCCAGCCCTGGAGCAGCTACCCATGATTCCATCTCAGACTATGGCCCACAGGACGGCAGACCCACGCCAATGCGGCGAGTCCCTGGCCGAGTTGGTGGTCGGGAGGGCATGAGGGGTCGTTCCCCTTCTCAGTATCATGACTTTTCAGAAAAATTGAAGATGTCTCCTGGGAGGAGCAGAGGCCCAGGGGGAGACCCTCATCACATAAACCCACATATGACCTTTTCAGAGAGGGCCAACAGGAGTTCTTTGCACACTCCCTTTTCTCCCAACTCAGAAAGCCTGGCCTCTGCTTATCACACAAACACTCGCGCTCATGCTTATGGGGACCCCAATGCAGGTTTGAATTCTCAGCTCCATTACAAGAGACAGATGTACCAACAGCAACAAGAGGAATATAAGGACTGGAGCAGCAGTTCTGCTCAGGGAGTGATCGCTGCGGCTCAGCACAGGCAGGAAGGACCCCGCAAGAGTCCAAGGCAGCAGCAGTTTCTTGACCGAGTACGGAGCCCCCTGAAGAATGACAAAGATGGCATGATGTATGGCCCACCGATGGGGACTTACCATGACCCCAGCGGTCAGGACGGTGGGCGCTGCCTCATGTCTAGTGACGGTCTTTCTAACAAAGGCATCGAATTGAAGCACAGCTCCCAGAAGTTACAACAAGAATCTTGTTGGGATCTTTCTCGGCAAACTTCTCCAGCCAAAAGCAGCGGTCCTCCAGGAATGTCCAGTCAAAAAAGGTATGGACCACCCCATGAGACCGACGGACATGGGCTAGCTGAGTCTACACAGTCATCCAAACCTAGTAATGTTATGCTAAGGCTTCCAGGTCAAGAGGATCATTCTTCTCAAAACCCCTTAATCATGAGGAGGCGTGTCCGTTCTTTTATCTCTCCCATTCCCAGTAAGAGACAGTCACAAGATGTGAAGAACAGTAACGCTGAAGATAAAGGGCGCCTCCTTCACCCACCAAAAGAAGGTGCTGATAAAGCCTTCAATTCCTATGCCCATCTTTCTCACAGCCAGGAGATCAAGTCCATCCCGAAGAGAGAATCCTCCAAGGACCTTCCAAGTCCAGATGGTAGAAACTGCCCTGCTGTTACCCTCACAAGTCCTGCTAAGACCAAAATACTGCCCCCACGGAAAGGACGGGGGTTGAAATTGGAAGCTATCGTTCAGAAGATCACATCCCCAAACATTAGGAGGAGTGCATCCTCGAACAGTGCAGAGGCTGGGGGAGACACAGTTACTCTCGATGACATCCTGTCTTTGAAGAGCGGCCCTCCCGAAGGCGGGAGTGGTGCTGTTCAGGATGCCGAGATGGAGAAGAGAAAAGGTGAGGTGGTGTCTGACCTAGTCTGTCCAACAAACCAGGAGTTGAGCATAGAAAAGCCTCTTGCACGGTCTTCGGAGGAGTGGCGTGGCAGTGGGGATGACAAAGTGAAGACCGAGACACACCCAGACACGGCCACTGCTGGAAAGGAACCCCCTGGTGCCATGACGTCCGCAACCTCACAGAAGCCTGGGAGTAACCAAGGGAGACCAGATGGTTCCCTGGGCGGGACAGCACCTTTAATCTTTCCTGACTCCAAGAATGTACCTCCAGCGGGCTCCTTGGCTCCTGAGGCAAACCCCAAGGCTGAAGAGAAGGAGAACGATACAGTGACGATTTCCCCCAAACAAGAGGGTTTCCCCCCAAAGGGTTATTTCCCATCAGGAAAGAAGAAGGGGAGACCCATTGGTAGTGTGAATAAGCAAAAGAAACAACAGCAGCCGCCACCTGCACCCCCTCAGCCCCCTCAGATACCAGAAGGTTCTGCAGATGGAGAGCCAAAGCCGAAAAAGCAGAGGCAAAGGAGGGAGAGAAGGAAGCCTGGGGCGCAGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATCGTAGAGCCCCAAGAACCTGAGATCAAGCTGAAGTATGCCACTCAGCCACTGGATAAAACTGATGCCAAGAACAAGTCTTTTTTCCCTTATATCCATGTAGTAAATAAGTGTGAACTTGGAGCCGTTTGTACAATCATCAATGCTGAAGAAGAAGAACAGACCAAATTGGTGAGGGGTCGGAAGGGTCAGAGGTCCCTGACCCCTCCACCCAGCAGCACTGAAAGCAAGGTGCTCCCAGCTTCATCCTTCATGCTGCAGGGACCTGTCGTGACAGAGTCTTCTGTTATGGGGCACCTGGTTTGCTGTCTGTGTGGCAAGTGGGCCAGTTACCGGAACATGGGCGACCTCTTTGGACCCTTTTATCCCCAAGATTATGCAGCCACTCTCCCCAAGAATCCGCCTCCTAAGAGGGCCACGGAAATGCAGAGCAAAGTTAAGGTACGGCACAAAAGCGCTTCCAATGGCTGCAAGACGGACACTGAGGAGGAGGAAGAGCAGCAGCAGCAGAAGGAGCAGCGGAGCCTGGCCGCCCACCCCAGGTTTAAGCGGCGCCACCGCTCGGAAGACTGTGGTGGAGGCCCCCGCTCCCTGTCCAGGGGGCTCCCTTGCAAAAAAGCGACCACCGAGGGCAGCAGCGAAAAGACTGTTTTGGACTCAAAGCCCTCCGTGCCCACCACTTCAGAAGGCGGCCCCGAGTTGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAATGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATAGCCAGAGAGATGGTGAGTACGAGAAATCCCTTACCAGTTGCTCTTTTTGTTACTTCTTTTTGA

Related Sequences

bmy_01030T0 Protein

Length: 1916 aa      View alignments
>bmy_01030T0
MQSFREQSSYHGNQQSYPQEVHGSSRIEEFSPRQAQMFQNFGGAGGGSGGSGGSSGGGRRGTAAAAAAAAMASETSGHQGYQGFRKEAGDFYYMAGSKDPVAAGTPQPAQRRPSGPVQSYGPPQGSSFGNQYGSEGHVGQFQAQHSALGGVSHYQQDYTGPFSPGSAQYQQQPSSQQQQQVQQLRQQLYQSHQPLPQATGQPASGSSHMQPMQRPSTLPASATGYQLRVGQFGQHYQSSAATSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHNVGSNAQAYGTQSNYSYQPQSMKNFEQTKIPQGTQQGQQQQQQQQQQQQQQQQQQQQQQHPPPPQHVMQYTNTATKLPLQSQVGQYSQPEVPVRSPMQFHQNFSPISNPSPAASVVQSPSCSSTPSPLMQSGENLQCGQGNVPMGSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGLEGVPEKRLTDPGLSSLSALSTQVANLPNTVQHMLLSDALTPQKKTSKRPSSSSKKADSCTNSEGSSQAEEQLKSPLAESLDGGCSSSSEDPGERVRQLSGQSTSSDTTYKGGASEKAGSSPAQVTQNEAPRLSASPVAREETASPGAKDMPLSSEGNPKVSEKTVGVIVSREAMTSRVEKPGGQEKGSQEDDPAATQRPPSTGGAKETSHASLPQPEPLGGGNKGNKNGDNNSNHNGEGNGQSGHSTGGSGFIGRTEPSKSPGSLRYSYKDSFGPAVPRNVSGFPQFPTGQDKGDFTGHGERKGRNEKFPSLLQEVLQGYHHHPDRRYSRSTQEHQGMAGGLEGATRPNVLVSQTNELASRGLLNKSIGSLLENPHWGPWERKSSGSAPEMKQINLADYPIPRKFEIEPQSSAHEPGGSLSERRSVICDISPLRQIVRDPGAHSLGHMGADTRLGRNERLNPSLSQSVILPGGLVSMETKLKSQSGQIKEEDFEQSKSQASFNNKKSGDHCHPTSIKHESYRGNASPGAATHDSISDYGPQDGRPTPMRRVPGRVGGREGMRGRSPSQYHDFSEKLKMSPGRSRGPGGDPHHINPHMTFSERANRSSLHTPFSPNSESLASAYHTNTRAHAYGDPNAGLNSQLHYKRQMYQQQQEEYKDWSSSSAQGVIAAAQHRQEGPRKSPRQQQFLDRVRSPLKNDKDGMMYGPPMGTYHDPSGQDGGRCLMSSDGLSNKGIELKHSSQKLQQESCWDLSRQTSPAKSSGPPGMSSQKRYGPPHETDGHGLAESTQSSKPSNVMLRLPGQEDHSSQNPLIMRRRVRSFISPIPSKRQSQDVKNSNAEDKGRLLHPPKEGADKAFNSYAHLSHSQEIKSIPKRESSKDLPSPDGRNCPAVTLTSPAKTKILPPRKGRGLKLEAIVQKITSPNIRRSASSNSAEAGGDTVTLDDILSLKSGPPEGGSGAVQDAEMEKRKGEVVSDLVCPTNQELSIEKPLARSSEEWRGSGDDKVKTETHPDTATAGKEPPGAMTSATSQKPGSNQGRPDGSLGGTAPLIFPDSKNVPPAGSLAPEANPKAEEKENDTVTISPKQEGFPPKGYFPSGKKKGRPIGSVNKQKKQQQPPPAPPQPPQIPEGSADGEPKPKKQRQRRERRKPGAQPRKRKTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSFFPYIHVVNKCELGAVCTIINAEEEEQTKLVRGRKGQRSLTPPPSSTESKVLPASSFMLQGPVVTESSVMGHLVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGCKTDTEEEEEQQQQKEQRSLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKATTEGSSEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMVSTRNPLPVALFVTSF*