Part of scaffold_21 (Scaffold)

For more information consult the page for scaffold_21 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HADHA ENSTTRG00000010204 (Bottlenosed dolphin)

Gene Details

hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009681, Bottlenosed dolphin)

Protein Percentage 97.37%
cDNA percentage 97.86%
Ka/Ks Ratio 0.30348 (Ka = 0.0121, Ks = 0.0399)

HADHA ENSBTAG00000015038 (Cow)

Gene Details

trifunctional enzyme subunit alpha, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020020, Cow)

Protein Percentage 92.98%
cDNA percentage 92.69%
Ka/Ks Ratio 0.19968 (Ka = 0.0365, Ks = 0.1828)

HADHA  (Minke Whale)

Gene Details

hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit

External Links

Gene match (Identifier: BACU014529, Minke Whale)

Protein Percentage 97.66%
cDNA percentage 98.49%
Ka/Ks Ratio 0.53647 (Ka = 0.0108, Ks = 0.0201)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2055 bp    Location:873930..828275   Strand:-
>bmy_01054
ATGGTGGCTTTCCGGGCAGTTGGCAGCCTCAGCCGCTTCACTGCTTCCAGGATGCTCCGCTGCCCAGGTTATATTTGCCGCAACTTTACAAAGTCCTCTGCTTTGCTGACCAGAACCCATATTAACTATGGAGTCAAAGGGGACGTAGCAGTTATTCGAATTAACTCACCCAATTCAAAGGTGAATACTCTGGGTCAAGAACTGCATTCAGAGTTCATAGAAGTAATGAATGAAGTCTGGTCTAGCAATCACATCAGAAGTGCTGTCCTTATCTCATCAAAGCCAGGGTGCTTCATTGCAGGTGCCGATCTCAACATGTTAACTGCTTGCACGACCTCTCAAGAGGTAACACAAATATCACAGGAAGCACAGAAAATGTTTGAGAAAGTTGAGAAGTCCACAAAGCCTATTGTGGCTGCCATCAATGGATCCTGCTTAGGAGGAGGACTTGAGGTGGGTGTGCCTGCTGCTTTTGACATGATGCTGACTGGTAGAGGCATTCGTGCAGACAGAGCAAAGAAAATGGGCCTGGTTGACCAACTGGTAGAACCACTGGGACCAGGAATAAAACCTCCAGAAGAACGGACAATTGAATACCTAGAAGAAGTTGCAATTACTTTTGCTAAAGGACTAGCTGATAAAAAGATCTCTCCAAAGAGAGACAAGGGATTGGTAGAAAAATTGACATCGTATGCCATGAGTATTCCATTTGTCAGGCAACAGATTTACAAAAAGGTGGAAGAAAAAGTACGAAAGCAGACCAAAGGCCTTTATCCTGCACCTCTGAAAATAATTGATAAATTTGGAGAGCTTGCAATGACCAAAGAATCAAAAGCCYTGATGGGACTTTACCGTGGTCAGACCCTATGCAAGAAGAATAAATTTGGAGCTCCGCGGAAGGAGGTTAAGCAGCTCGCCATTCTTGGCGCAGGGCTAATGGGGGCCGGCATCGCCCAGGTCTCCGTGGATAAGGGCCTACAGACTATACTGAAGGATGCTACGCTAGCCGCGCTGGGGCGAGGACAGCAACAAGTGTTCAAAGGCAACTTGACTGGGCAGCTCGATTACCAGGGTTTTGAAAAGGCTGACATGGTGATTGAAGCTGTTTTTGAGGACCTCAGTCTTAAGCACAAAGTGCTCAAGGAAGTAGAAGCGGTGATTCCAGATCACTGTGTCTTTGCCAGCAACACATCTGCTCTCCCAATCAACGAAATTGCTGCTATCAGTAAAAGACCTGAGAAGGTGATTGGCATGCACTACTTCTCTCCTGTGGACAAGATGCAGCTGCTGGAGATTATCACAACTCCAAAAACTTCKAAGGACACAACTGCTTCTGCTGTAGAAGTTGGTCTCAAACAGGGGAAGGTCATCATTGTGGTTAAGGACGGACCTGGCTTCTATACCACCAGGTGCCTCGCACCCATGATGTCTGAAGTCATCAGAATTCTCCAGGAAGGAGTTGGCCCTAAGAAGCTGGATTCCCTGACCACAAGCTTTGGCTTTCCTGTGGGCGCTGCTACACTGGTGGATGAAGTTGGCGTGGATGTAGCAAAACACGTAGCAGAAAATCTAGGCAAAGTGTTTGGGGAGCGGTTTGCAGGTGGAAGCCTAGAAGTGCTGAAGCAGATGATATCCAAGGGCTTCCTGGGTCGCAAGTCCGGGAAGGGCTTTTACATCTACCAGGAGGGTGTGAAGARTAAGAATTTGAACTCTGACATAGACAGTATTTTGGCAAGTCTGAAGATGCCTTCTCAGCCTGATGTCTCCTCGGACGAAGACATCCAGTACCGCCTGGTGACCAGATTTGTGAACGAGGCTGTCCTGTGCCTGCAGGAAGGGATCTTGGCCACGCCTACAGAGGGAGACATCGGCGCGGTCTTTGGGCTTGGCTTCCCCCCCTGTCTTGGAGGGCCCTTCCGCTTTGTGGATCTGTATGGTGCTCAGAAGATAGTGGACCGGCTCCGGAAGTACGAGGCTGCCTATGGAAAACAGTTCACCCCKTGCCAGCTGCTTATGGACCACGCCAGCAACCCTAACAAGAAGTTCTACCAGTGA

Related Sequences

bmy_01054T0 Protein

Length: 685 aa      View alignments
>bmy_01054T0
MVAFRAVGSLSRFTASRMLRCPGYICRNFTKSSALLTRTHINYGVKGDVAVIRINSPNSKVNTLGQELHSEFIEVMNEVWSSNHIRSAVLISSKPGCFIAGADLNMLTACTTSQEVTQISQEAQKMFEKVEKSTKPIVAAINGSCLGGGLEVGVPAAFDMMLTGRGIRADRAKKMGLVDQLVEPLGPGIKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTSYAMSIPFVRQQIYKKVEEKVRKQTKGLYPAPLKIIDKFGELAMTKESKALMGLYRGQTLCKKNKFGAPRKEVKQLAILGAGLMGAGIAQVSVDKGLQTILKDATLAALGRGQQQVFKGNLTGQLDYQGFEKADMVIEAVFEDLSLKHKVLKEVEAVIPDHCVFASNTSALPINEIAAISKRPEKVIGMHYFSPVDKMQLLEIITTPKTSKDTTASAVEVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVGPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAENLGKVFGERFAGGSLEVLKQMISKGFLGRKSGKGFYIYQEGVKXKNLNSDIDSILASLKMPSQPDVSSDEDIQYRLVTRFVNEAVLCLQEGILATPTEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLRKYEAAYGKQFTPCQLLMDHASNPNKKFYQ*