Sequence detailsbmy_01060 (Coding sequence)

Part of scaffold_21 (SequenceType object (1))

For more information consult the page for scaffold_21 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OTOFENSTTRG00000010249 (Bottlenosed dolphin)

Gene Details

otoferlin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009737, Bottlenosed dolphin)

Protein Percentage 91.33%
cDNA percentage 92.39%
Ka/Ks Ratio 0.17303 (Ka = 0.0162, Ks = 0.0936)

BT.95227ENSBTAG00000009650 (Cow)

Gene Details

otoferlin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015350, Cow)

Protein Percentage 95.12%
cDNA percentage 93.63%
Ka/Ks Ratio 0.06437 (Ka = 0.0213, Ks = 0.3315)

Genome Location

Sequence SequenceType object (2)

Length: 4446 bp    Location:1094399..1060563   Strand:-
Raw sequence 
>bmy_01060
ATGAAGCTCGGCAAGAACCGGCCTCACAAAGAGGAACCCCAAAGACAAGTACTGGAGATGGAGGACCTTGACCGCCTGGCCATTCGGCTGGGGGATGGGCTGSCTCCTGACTCCGTGTCACTAGCTTCCGTCACAGCTCTCACCACCAACGTCTCCAACAAGCGATCCAAGCCAGACATTAAGATGGAGCCAAGTGCCGGGCGGCCCATGGATTACCAGGTCAGCATCACGGTGATCGAGGCTCGGCAGCTGGTAGGCTTGAACATGGACCCCGTGGTGTGCGTGGAGGTGGGCGATGACAAGAAGTACACATCCATGAAGGAGTCCACTAACTGCCCCTACTACAACGAGGTGATTCACTCCAAGAACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGGACCGTGTACTCCCAGCCGGAGCACCAGTTCCACCACAAGTGGGCCATCCTGTCGGACCCCGATGACATCTCCGCGGGGCTGAAGGGCTATGTGAAGTGCGATGTCGCCGTGGTGGGCAAGGGGGACARCATCAAGACGCCCCACAAGGCCAACGAGACGGATGAGGATGACATTGAGGGGAACTTGCTGCTCCCCGAGGGGGTGCCCCCCGAACGCCAGTGGGCCCGGTTCTACGTGAAGATTTACCGAGCAGAGGGGCTGCCCCGCATGAACACAGGCCTCATGGCCAACATGAAGAAGGCTTTCATTGGTGAGAGCAAGGACCTGGTTGACCCCTACGTGCAAGTCTTCTTTGCTGGCCAGAAGGGCAAGACTTCAGTGCAGAAAAGCAGCTATGAGCCACTGTGGAATGAGCAGGTGGTCTTTACAGACCTGTTTCCCCCGCTCTGCAAGCGCATGAAGGTACAGATCCGGGACTCAGACAAGGTGAACGACGTGGCCATCGGCACCCACTTCATTGACCTGCGTAAGATTTCCAACGAYGGAGACAAAGGCTTCCTGCCCACGCTGGGCCCCGCCTGGGTGAACATGTATGGCTCCACACGCAACTACACGCTGCTGGACGAGCACCAGGACCTGAACGAGGGCCTGGGGGAGGGCGTGTCTTTCCGCGCCCGCCTCATGCTGGGCCTGGCGGTGGAGATCCTGGACGCTTCCAACCCTGAGCTCACCAGCTCCACGGAGGTGCAGGTGGAACAGGCCACACCCGTCTCCGAGAGCTGCGTGGGGAAAATGGAAGAATTCTTTCTATTTGGAGCCCTCCTGGAGGCCTCAATGATCGACCGGAAAAACGGAGACAAGCCCATCACCTTTGAGGTCACTATAGGCAACTATGGGAACGAAGTCGATGGTCTGTCTCGACCCCAGCGGCCTCGGCCTCGGCCTCGGAAGGAGCCTGGGGACGAGGAGGAAGAGGATCTGATCCAGAAGTCGAGTGACGACGAGACTGACGAGGGTGGGGACCTGCCCTCAGTCTCCTCCAGCCCACCCATGCGGCCCCAGATCACCGACAGGAACTACTTCCATCTGCCCTACTTGGAGCGCAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGGACCAGCGCCGCCGCCTCTACAATGCCAACATCATGGACCACATCGCAGACAAGCTGGAAGAAGGCCTGAATGATGTGCAGGAGATGATCAAAACGGAAAAGTCCTACCCTGAGCGTCGACTGCGGGGCGTCCTGGAGGAGCTGAGCTGTGGCTGCTACCGTTTCCTCTCCCTCGTGGACAAGGACCAGGGCCACTGGTCCCGCACCAGGCTGGACCGGGAGCGCCTCAAGTCCTGCATGCAGGAGCTGGAGAGCATGGGGCAGCAGGCCAAGACCCTGCGGGCACAGGTGAAGTGGCACACGGTGCGGGACAAGCTGAGGCTGTGCCAGAACTTCCTGCACAAGCTGCGCTTCCTGGCAGACGAGCCTCAGCACAGCGTCCCCGACGTCTTCATCTGGATGATGAGCAACAACAAGCGCATCGCCTACGCCCGGGTGCCCTCCAAGGACCTGCTCTTCTCCACCGTGGAGGAGGAGCTGGGCAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTCAAGCTGCCAGGGAAGCGGGGCTTCGGCTCGGCGGGCTGGACGGTGCAGGCCAAGCTGGAGCTCTACCTGTGGCTGGGCCTCAGCAAGCAGCGCAAGGACTTTCTGTGCGGCCTGCCCTGCGGCTTCGAGGAGGTCAGGGCGGCCCAGGGCCCGGGCCTGCACGCCTTCCCACCCATCAGCCTGGTCTACACCAAGAAGCAGGCCTTCCAGCTSCGTGCCCACATGTACCAGGCGCGCAGCCTCTTTGCCGCCGACAGCAGCGGTCTCTCGGACCCCTTCGCCCGTGTCTTCTTCATCAACCAGAGTCAGTGCACAGAGGTGCTGAATGAGACCCTGTGCCCCACCTGGGACCAGATGCTGGTGTTCGACAACCTGGAGCTCTATGGCGAAGCTCATGAGTTGCGGGACGACCCCCCCATCATTGTCATCGAAATCTACGACCAGGACACCATGGGCAAAGCCGACTTCATAGGCCGGACCTTTGCCAAGCCCCTGGTGAAGATGGCCGACGAGGCATACTGCCCGCCCCGCTACCCGCCCCAACTCGAGTACTACCAGATCTACCGCGGCAATGCCACGGCCGGGGACCTGCTGGCCGCCTTCGAGCTGCTGCAGATTGGACCAGCAGGGAAGGCCGACCTGCCGCCCATCAATGGCCCAGTGGACGTGGACCGAGGTCCCATCATGCCTGTGCCTATGGGCATCCGGCCCGTGCTCAGCAAGTACCGGATAGAGGTGCTGTTCTGGGGCCTGCGGGACCTGAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCGCGGGTAGACATCGAGTGCGCGGGGAAGGGAGTGCAGTCGTCCCTGATCCACAATTACAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGACCTCCCAGAGAACGAGCTCCTGCACCCGCCCTTGAACATCCGCGTGGTGGACTGCCGGGCCTTCGGCCGCTACACCCTGGTCGGCTCCCATACCGTCAGCTCCCTGCGGCGCTTCATCTACCGGCCCCCGGACCGCTTAGCCCCCAGCTGGAACACCTCGGGCAGGCTCCTCCAGGGCCGCCGTGTGCTGTACAGTGCGGGCCCCTCTTCTCACCCCACAGGGGAGGTCGTGGTGAGCATGGAGCCGGAGGTGCCTGTCAAGAAGCTGGAGACCGTGGTGAAGCTGGATGCGACTTCTGATGCCGTCATCAAGGTGGATGTGGCTGATGAGGAGAAAGAGAGGAAGAAGAAGAAGAAGGGCAGCTCAGAAGAACCAGAGGAGGAGGAGCCAGATGAGAGCATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCATCGATACCATGAAAGAGGGCAAGGAGAAGGCAAGGGCTGCAAAGGAGGAGAAGAAGAAGAGAACCCAGAGCCCAGGCCCAGGCCAAGGGTCTGAGGCCCCTGAGAAGAAGAAACCCAAGATTGATGAACTCAAGGTGTACCCCAAGGAGCTGGAGTCAGAGTTCGACAGCTTCGAGGACTGGCTGCACACGTTCAACCTGCTTCGGGGCAAGACGGGGGACAACGAGGATGGCGCGACCGAGGAGGAGCGCATCGTGGGCCGCTTCAAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGGCTATGACCCCACCTATGGCATGTTCCAGGGCATCCCCAGCAATGACCCCATCAACGTGCTGGTCCGGGTCTACGTGGTCCGGGCCACGGACCTGCACCCCGCAGACATCAATGGCAAAGCCGACCCCTACATCGCCATCCGGCTAGGCAAGACTGACATCCGTGACAAGGAGAACTACATCTCCAAGCAGCTCAACCCCGTCTTTGGGAAGTCCTTTGACATTGAGGCCTGCTTCCCCATGGAATCCTTGCTGACGGTAGCCGTATACGACTGGGATCTGGTAGGCACCGATGACCTCATTGGGGAAACCAAGATCGACCTGGAGAACCGGTTCTACAGCAAGCACCGCGCCACCTGTGGCATCGCCCAGACCTATTCCAYGTGCGTGGGACACGGCTACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAGGAGGGCAAAGTGGACGGCCCCCACTTCGGGCCCCCTGGGAGAGTGAAGGTGTCCAACCGCGTCTTCACAGGGCCCTCCGAGATCGAGGACGAGAACGGGCAGAGGAAGCCCACGGAAGAGCACGTGGCACTGTTGGCCCTGAGGTACTGGGAGGACATCCCCCGCGTGGGCTGCCGCCTGGTGCCGGAACACGTGGAGACGCGGCCGCTGCTCAACCCTGACAAGCCGGGCATCGAGCAGGTGACTGGCCTGGCCGGGATCTGA

Related Sequences

bmy_01060T0 SequenceType object (3)

Length: 1482 aa      View alignments
>bmy_01060T0
MKLGKNRPHKEEPQRQVLEMEDLDRLAIRLGDGLXPDSVSLASVTALTTNVSNKRSKPDIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSDPDDISAGLKGYVKCDVAVVGKGDXIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFYVKIYRAEGLPRMNTGLMANMKKAFIGESKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDASNPELTSSTEVQVEQATPVSESCVGKMEEFFLFGALLEASMIDRKNGDKPITFEVTIGNYGNEVDGLSRPQRPRPRPRKEPGDEEEEDLIQKSSDDETDEGGDLPSVSSSPPMRPQITDRNYFHLPYLERKPCIYIKSWWPDQRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCYRFLSLVDKDQGHWSRTRLDRERLKSCMQELESMGQQAKTLRAQVKWHTVRDKLRLCQNFLHKLRFLADEPQHSVPDVFIWMMSNNKRIAYARVPSKDLLFSTVEEELGKDCAKVKTLFLKLPGKRGFGSAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVRAAQGPGLHAFPPISLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELRDDPPIIVIEIYDQDTMGKADFIGRTFAKPLVKMADEAYCPPRYPPQLEYYQIYRGNATAGDLLAAFELLQIGPAGKADLPPINGPVDVDRGPIMPVPMGIRPVLSKYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHTVSSLRRFIYRPPDRLAPSWNTSGRLLQGRRVLYSAGPSSHPTGEVVVSMEPEVPVKKLETVVKLDATSDAVIKVDVADEEKERKKKKKGSSEEPEEEEPDESMLDWWSKYFASIDTMKEGKEKARAAKEEKKKRTQSPGPGQGSEAPEKKKPKIDELKVYPKELESEFDSFEDWLHTFNLLRGKTGDNEDGATEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRVYVVRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEACFPMESLLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSXCVGHGYNIWRDPMKPSQILTRLCKEGKVDGPHFGPPGRVKVSNRVFTGPSEIEDENGQRKPTEEHVALLALRYWEDIPRVGCRLVPEHVETRPLLNPDKPGIEQVTGLAGI*