Sequence detailsbmy_01062 (Coding sequence)

Part of scaffold_21 (SequenceType object (1))

For more information consult the page for scaffold_21 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CIB4ENSTTRG00000010269 (Bottlenosed dolphin)

Gene Details

calcium and integrin binding family member 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009741, Bottlenosed dolphin)

Protein Percentage 65.55%
cDNA percentage 75.35%
Ka/Ks Ratio 0.34227 (Ka = 0.2433, Ks = 0.711)

BT.36386ENSBTAG00000005041 (Cow)

Gene Details

calcium and integrin-binding family member 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006645, Cow)

Protein Percentage 76.67%
cDNA percentage 77.5%
Ka/Ks Ratio 0.15106 (Ka = 0.167, Ks = 1.1058)

CIB4 (Minke Whale)

Gene Details

calcium and integrin binding family member 4

External Links

Gene match (Identifier: BACU014535, Minke Whale)

Protein Percentage 74.17%
cDNA percentage 78.89%
Ka/Ks Ratio 0.23028 (Ka = 0.1887, Ks = 0.8194)

Additional orthologs identified in other species via the OPTIC pipeline.

CIB4 (Human)   Cib4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 363 bp    Location:1172549..1160497   Strand:-
Raw sequence 
>bmy_01062
ATGAACCTGACATTGATAAGCCTCCTTCCTCTTTCTCCTCCTCCTCCCCACCCACAGGTCAACCCTTTCAGAGACCGAATCTGCAGAGTGTTCTCCCACAACAATGTGTTCTCCTTCGAGGATGTGCTGGGCATGGCATCCGTGTTTAGCGAGCAGGCCTGCCCCAGCTTGAAGATCGAGTACGCCTTCCGCATTTACGATTTTAATGAGAACGGCTTCATCGACGAGGAGGACCTGCAGAGGATCATCCTCCGACTGCTCAACAGCGACGACGTGTCAGAGGACCTCCTGACCGACCTCACCAGCCACGTGTGTGCCCTGGGCTGTGGGACGGTGGCTGGCGTGGGCCCCGCTATCACCTGA

Related Sequences

bmy_01062T0 SequenceType object (3)

Length: 121 aa      View alignments
>bmy_01062T0
MNLTLISLLPLSPPPPHPQVNPFRDRICRVFSHNNVFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQRIILRLLNSDDVSEDLLTDLTSHVCALGCGTVAGVGPAIT*