Part of scaffold_21 (Scaffold)

For more information consult the page for scaffold_21 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF3C2 ENSTTRG00000012517 (Bottlenosed dolphin)

Gene Details

general transcription factor IIIC, polypeptide 2, beta 110kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011876, Bottlenosed dolphin)

Protein Percentage 98.67%
cDNA percentage 98.63%
Ka/Ks Ratio 0.22127 (Ka = 0.0067, Ks = 0.0301)

GTF3C2 ENSBTAG00000017283 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022977, Cow)

Protein Percentage 93.52%
cDNA percentage 94.29%
Ka/Ks Ratio 0.27423 (Ka = 0.0349, Ks = 0.1273)

GTF3C2  (Minke Whale)

Gene Details

general transcription factor IIIC, polypeptide 2, beta 110kDa

External Links

Gene match (Identifier: BACU014553, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 99.44%
Ka/Ks Ratio 0.23958 (Ka = 0.0028, Ks = 0.0118)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2910 bp    Location:1809396..1787241   Strand:-
>bmy_01083
ATGGATCCCTACGGGGTCGGCTGTGTTGCTCTGGAGGAGGCCGGCCCCGTGGGGAACATGACTGTGGTAGACTCTCCTGGACAAGAGGTGCTAAACCAGCTTGATGTCAAGGCCTCTTCAGAAACAACCAGTGTGGAGGCTTCCATAGAGACGTTATTACCTACCCCTTTGCCTGGATTTGAGGATTCTCTTGATGAGAGGAGGCTCCCTCCAGAACAGGAAACCCTCTCCAGACTGGAACAGCAAGATCTTTCTTCAGAGATGTCAAAGGTCCCAAAGCCTAGGGCCTCAAAGCCTGGCCCGAAGAGAGGTGGTAGGACACGGAAAGGCCCCAAAAGGCCCCAGCAGCCTAATTCTCCATCAGCCCCTCGGGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCCCCATGCCTAAGAAACGAGGTCGAAAGTCCAAGGCAGATCTGCTACTGCTGAAGTTGTCAAAAGGCCTAGATCAGCCAGAGTCTCCACATCCAAAGAGGCCCCCTGAGGACTTTGAGACCCCTCCTGGGGAACGACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTATCTTCAGGAACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCTCCAGTGTCCTGTCCTGAGAGCCCCAAGGTGAGCAGCCCCACCAAACCCAAGAAGAGCCAGCAGCAGGCAGCCTGTCATTATAGAGAAGAAGAGGATGACACCGCACGGGACGAAGACTTCGTTCTCCAGGTTGAGGCTGAAGATGGAGAAGAAAGTGAGGCCCCAAGTGAGAGCTCGTCTGACCCCGAGCCTACAGTGCCCCGGAGCACCGCACGAGGATCCACTTCAGGGAAGCAGAAGCCACACTGCCGGGGAGTGGCTCCCAATGGCTTACCAAATCACATCATGGCTCCTGTTTGGAAGTGCCTTCATCTCACCAAGGACCTCCGAGAACAGAAGCATTCATACTGGGAGTTTGCGGAATGGATTCCTTTAGCCTGGAAGTGGCAATTGTTATCTGAACTTGAGGCAGCTCACTACCTGCCCCAGGAGGAGAAGTCGCCACTGTTTTCTGTACAACGTGAAGGACTTCCTGAAGATGGCACACTCTACCGAATAAACAGATTTAGCTCTATCACAGCACACCCAGAGCGCTGGGATGTGTCTTTCTTTACGGGGGGACCGCTCTGGGCTCTGGACTGGTGCCCAGTGCCAGAGGGGGCAGCAGCCTCGCAGTATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACCCACTGAGCCAGCTTCATTCGGGCCCTGGGCTGCTCCAGCTCTGGGACCTTGGGACCTTGCAGCAAGAAAGCTGTCCTGGCAACAGAGCCCACTTTGTCTATGGGATTGCTTGTGACCACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCGTGGGAACTTCCAGGCACCCCTCGGAAGGCGCCTCTCTTGCCCCGGTTGGGTCTCCTGGCTCTTGCCTGCTCAGACGGGAAGGTGCTGCTGTTCAGTCTGCCCCATCCCGAGGCCCTGCTGGCTCAGCAGCCCCTAGATGCAGTGAAGCCTGCCATCTATAAGGTCCAATGTGTGGCAACCCTTCAGGTGGGGTCTATGCAAGCGTCAGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGCTTGGATGCCCACCCGGCCCCACCACCACCTGGCTGCTGGATATTATAATGGCATGGTGGTTTTCTGGAACCTTCCCACGAACTCGCCTCTGCAGCGGATACGGCTCTCTGATGGCTCCTTGAAGCTCTACCCCTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAACAGTCATTTCCTAGTCTCTGCAGGGAGCGACCGGAAAATCAAATTCTGGGACCTTCGACGACCTTATGAACCAATAAACTCTATCAAGCGCTTCTTGAGTACAGAGCTGGCCTGGCTGCTCCCCTACAATGGCGTCACTGTGGCTCAGGACAACTGCTATGCCTCGTACGGCAGGATGGAGAGAGGAGGAGCTCTGGGGGCAAGCCCTAAGGGTTGGGGTGCACTGTGCCAGATTGTTGTGGGGAGAGGAGGTTATGGACTCTGTGGAATTCATTATATTGATGCTGGTTACCTTGGTTTCAAGGCCTACTTCACTGCTCCTCGAAAAGGCACTGTCTGGAGTCTTTCAGGATCCGACTGGCTCGGGACAATAGCTGCAGGAGATATATCTGGGGAGCTCATTGCAGCTATATTGCCTGATATGGCACTGAACCCAATAAATGTCAAACGACCTGTAGAGCGAAGATTCCCTATATATAAAGCAGATCTGATGCCATATCAGGACAGTCCTGAAGGTCAGGACCACTCTTCTGCTTCATCCGGGGCCCCCAACCCTCCCAAGGCTCGAACTTACGCTGAAACCGTCAACCATCACTACTTGCTCTTTCAAGACACAGATTTGGGTTCATTCCACGGTCTGCCCCACAGAGAACCAATACTGCGCATGCAGGAGGGAGAGGGGCAAACGCGGCTCTGCCTGGACCGGCTGCAGCTGGAAGCTATTCATAAGGTAGAAACCTTATCTCTCATCTTCGCCATCCTTCATCTCATTTCCTCCCAACTCTGGGCCTCTAAGACTCACCCTAAAGCAACAACTGTACGTTTCAGCCCAAACCTGGACTCCTACGGATGGCTGGTCTCTGGGGGGCAGTCAGGGCTCGTTCGGATCCATTTTGTCCGTGCACTCACCTGCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAGCTGGCCTCCCCCACTAAAGGGCCTGGCTTCCCTCCAACCAGCCATCGCCTTCTGCCTGGTCCCTAG

Related Sequences

bmy_01083T0 Protein

Length: 970 aa      View alignments
>bmy_01083T0
MDPYGVGCVALEEAGPVGNMTVVDSPGQEVLNQLDVKASSETTSVEASIETLLPTPLPGFEDSLDERRLPPEQETLSRLEQQDLSSEMSKVPKPRASKPGPKRGGRTRKGPKRPQQPNSPSAPRVPGLLDQSNPLSTPMPKKRGRKSKADLLLLKLSKGLDQPESPHPKRPPEDFETPPGERPRRRAAQVALLYLQELAEELSTALPAPVSCPESPKVSSPTKPKKSQQQAACHYREEEDDTARDEDFVLQVEAEDGEESEAPSESSSDPEPTVPRSTARGSTSGKQKPHCRGVAPNGLPNHIMAPVWKCLHLTKDLREQKHSYWEFAEWIPLAWKWQLLSELEAAHYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAAASQYVALFSSPDMNETHPLSQLHSGPGLLQLWDLGTLQQESCPGNRAHFVYGIACDHGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPLDAVKPAIYKVQCVATLQVGSMQASDPSECGQCLSLAWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGRMERGGALGASPKGWGALCQIVVGRGGYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLMPYQDSPEGQDHSSASSGAPNPPKARTYAETVNHHYLLFQDTDLGSFHGLPHREPILRMQEGEGQTRLCLDRLQLEAIHKVETLSLIFAILHLISSQLWASKTHPKATTVRFSPNLDSYGWLVSGGQSGLVRIHFVRALTCPLGHRMQLESRAHFNAMFQLASPTKGPGFPPTSHRLLPGP*