Sequence detailsbmy_01090 (Coding sequence)

Part of scaffold_21 (SequenceType object (1))

For more information consult the page for scaffold_21 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFT172ENSTTRG00000012524 (Bottlenosed dolphin)

Gene Details

intraflagellar transport 172 homolog (Chlamydomonas)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011885, Bottlenosed dolphin)

Protein Percentage 96.45%
cDNA percentage 96.34%
Ka/Ks Ratio 0.2028 (Ka = 0.007, Ks = 0.0347)

IFT172ENSBTAG00000018157 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024164, Cow)

Protein Percentage 97.54%
cDNA percentage 95.22%
Ka/Ks Ratio 0.07684 (Ka = 0.0121, Ks = 0.157)

Additional orthologs identified in other species via the OPTIC pipeline.

IFT172 (Human)   Ift172 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5298 bp    Location:1918179..1875961   Strand:-
Raw sequence 
>bmy_01090
ATGCAGTTGAAGCACCTGAGGACCCTGCTGAGCCCCCAGGATGGAGCTGCAAAGGTCACCTGCATGGCATGGTCCCAGAACAATGCCAAATTTGCTGTCTGCGCAGTGGACCGAGTGGTGTTGCTGTATGATGAACATGGGGAGCGAAGAGATAAATTCTCCACCAAACCAGCCGACATGAAGTATGGCAGGAAGAGCTATATGGTGAAGGGCATGGCTTTTTCTCCTGATTCCACCAAGATTGCCATAGGACAGACTGACAACATCATCTATGTCTACAAGATTGGAGAAGATTGGGGTGACAAGAAAGTCATCTGTAACAAGTTCATCCAGACGAGTGCTGTTACTTGTCTGCAGTGGCCAGCAGAATACATCATTGTCTTTGGACTGGCTGAAGGGAAGGTTCGTTTAGCAAACACCAAAACTAATAAATCATCTACCATCTATGGGACAGATTCTTACGTGGTGTCCCTGACAACGAATTGCTCTGGGAAAGGAATTCTCTCTGGTCATGCAGATGGCACCATTGTTAGGTATTTCTTTGATGATGAAGGCTCTGGAGAGTCACAGGGGAAGTTGGTGAACCACCCATGCCCACCCTATGCCTTGGCTTGGGCAACCAACAGCATTGTGGCTGCAGGCTGTGATCGGAGGATTGTGGCCTATGGAAAGGAAGGCCACGTGCTACAAACTTTTGACTATAGCCGTGACCCTCAGGAACGGGAGTTCACCACAGCTGCAGCAAGTCCTGGGGGCCAGTCTGTTGTGCTGGGAAGTTATGACAGACTTCGGGTACTCAACTGGAGCCCTCGAAGAAGCATCTGGGAAGAGGCAAAGCCCAAGGAGATTGCCAACTTATACACCATCACTGCCTTGGCCTGGAAGCGGGATGGCTCACGACTCTGTGCGGGCACACTCTGTGGTGGAGTGGAACAGTTTGACTGCTGCCTCCGAAGGAGCATTTACAAGAATAAGTTTGAGTTGACGTATGTGGGACCTAGCCAGGTGATTGTGAAGAACCTCTCATCGGGGACCCGAGTGGTACTCAAGTCACACTATGGCTATGAGGTGGAAGAGGTGAAAATCCTGGGAAAGGAACGCTACCTGGTGGCCCACACGTCAGACACATTGTTGCTGGGGGACCTGAACACTAATCGCCTTAGTGAGGTAGGAACCAAAAATGGAGAGGTAGCTTGGCAGGGATCTGGTGGCAATGAGAAGTATTTCTTTGAAAATGAAAATGTATGCATGATCTTCAATGCTGGAGAGCTAACCCTGGTGGAATATGGGAGTAATGATACCCTGGGTTCTGTACGTACTGAATTCATGAACCCCCATCTCATCAGTGTCCGTATTAATGAGAGGYGCCAGCGAGGAATGGAGGATAATAAGAAATTGGCTTATCTTGTTGATATTAAGACTATTGCTGTAGTGGACCTGATTGGTGGCTACAACATTGGCACCATCAGCCATGAGAGCCGTGTGGATTGGCTGGAACTTAATGAGACTGGGCACAAGCTTCTCTTCAGGGACCGGAAACTTCGTTTGCACCTGTACGACATTGAAAGCTGCTCTAAGACAATGATCCTCAGCTTCTGCTCCTACGTGCAGTGGGTCCCAGGAAGTGATGTGCTGGTAGCTCAGAACCGAAACAACTTGTGTGTGTGGTACAACATTGAGGCACCTGAGAGAGTCACCATGTCCTCTATCAGGGGTGATGTTGTAGGTCTGGAGCGGGGCGGGGGAAAGACCGAGGTGATGGTGACTGAAGGTGTGACTACAGTTGCCTACACACTGGATGAGGGCCTTATTGAGTTTGGAACAGCCATTGATGACGGCAACTACACCAGGGCAGCAGCCTTCTTAGAGACTCTGGAAATGACCCCAGAAACAGAGGCAATGTGGAAAACCTTGAGTAAGCTGTCACTGGAAGCAAGGCAGCTACACATTGCTGAGAGGTGCTTTTCTGCTTTGGGCCATGTAGCAAAAGCTCGATTCCTACATGAGACCAATGAGATTGCAGATCAAGTGTCTCGGGAATATGCAAGTATTCTCCTCCTGATTCGTTCAGGTGGAGAAGGAACAGACTTTTATCAGGTCCGAGCACGTCTAGCCATGCTGGAGAAGAACTACAAGCTGGCCGAAATGATCTTCTTAGAACAGAACGCTGTTGAGGAGGCCATGGACATGTACCAGGAGCTACACCGTTGGGACGAATGTATCGCTGTGGCTGAGGCCAAGGGGCACCCAGCCCTAGAGAAGCTGCGCCGGGGTTACTACCAGTGGCTGATGGACACACAGCAAGAGGAGCGAGCAGGCGAACTTCAGGAGAGCCAAGGGGATGGGCTAGCAGCCATCAGCCTCTACCTCAAAGCTGGGCTCCCTGCCAAAGCTGCTCGGCTGGTGCTGACCCGAGAGGAGCTGCTGGCCACCACAGAGCTGGTAGAGCACATCACTGCAGCCCTTATCAAGAGCGAACTGTATGAAAGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGGGCCCTGGAGTGCTACCGTAAAGGCAACGCGTTCATGAAAGCGGTGGAGCTGGCTCGATTGGCATTCCCAGTGGAGGTGGTGAGACTAGAGGAGGCGTGGGGGGACCACTTGGTGCAGCAGAAGCAGCTTGATGCGGCCATTAATCACTACATTGAAGCCAGGTGCTCCATTAAGGCAATCGAGGCTGCCCTGGGTGCCCGCCAGTGGAAGAAGGCAATTTATATATTAGATCTACAGGACCAGAACACTGCGTCCAAATACTATCCTCGTGTGGCCCAACACTATGCGTCTCTGCAGGAGTATGAGATTGCTGAGGAGCTCTACACTAAGGGAGACCGGACGAAAGATGCCATAGACATGTACACCCAGGCTGGCCGCTGGGAGCAAGCCCACAAGCTGGCAATGAAGTGCATGAGACCAGAAGATGTGTCGGTGCTGTACATCACCCAGGCTCAGGAGATGGAGAAGCAGGGCAAGTACCGAGAGGCTGAAAGGCTATATGTGACAGTGGAAGAGCCTGATCTTGCCATCACCATGTTCAAAAAGCACAAGTTGTATGATGATATGATCCGCCTAGTAGGGAAGCACCACCCAGATCTCCTCAGCGACACACACCTACATCTGGGCAAGGAGCTGGAGGCTGAAGGCCGACTACAGGAGGCTGAATATCACTACCTCGAGGCCCAGGAGTGGAAGGCAACAGTGAATATGTACCGGTCCAGTGGGCTTTGGGAAGAGGCCTACCGGGTGGCCAAGGCTCACGGAGGAGCTAATGCCCACAAACACGTGGCCTATCTGTGGGCAAAGAGCCTGGGAGGTGAGGCTGCAGTTAGACTGCTCAATAAGCTGGGACTCCTGGAAGCTGCTATTGACCATGCTGCTGACAACTGCTCCTTTGAATTTGCTTTTGAACTCTCTCGGCTGGCCCTCAAGCACAAAACTCCTGAGATTCATCTCAGATACGCTATGTTCCTGGAGGATGAGGGAAAATTTGAAGAGGCTGAAGCTGAATTCATCAGGGCTGGTAAACCCAAGGAAGCAGTCCTCATGTTTGTCCATAACCAGGATTGGGAGGCAGCTCAGCGTGTGGCCGAGGCCCACGACCCTGACAGCGTCACTGAGGTGCTCATGGGGCAGGCCCGGGGGGCCTTGGAGGAGAAGGACTTCCAGAAAGCAGAAGGGCTGCTGCTTCGGGCCCAGAGACCAGGCCTGGCCCTCAGTTACTATAAGGAGGCTGGACTATGGAGCGATGCCCTGCGGATCTGCAAGGACTACATGCCTAGCCAGCTGGAGGCACTGCAGGAAGAGTATGAGCGGGAAGCTACCAAGAAGGGGGCCAGGGGCATGGAAGGACTGGTGGAACAGGCTCGACAGTGGGAGCAGGCTGGAGAATACAGCCGTGCAGTCGACTGTTACCTCAAAGTGCGGGATGCAGGGAGCAGCAGCCTGGTGGAGAAGTGCTGGATGAAGGCAGCTGAACTCTCCATCAAGTTTCTACCTCCCCAACGCAGTCTGGAAGTAGTTCGGGCTGTGGGACCCCAGCTGATTGGAATTGGAAAGCACAGTGCAGCTGCAGAGCTCTATCTGAACCTGGACCTAGTCAAGGAAGCGATCGATGCTTTCCTTGAGGGTGAGGAATGGAACAAGGCCAAGCGTGTGGCTAAGGAGTTAGATCCCCGGTATGAAGACTATGTGGACCAGCATTATAAAGAGTTCCTCAAGAACCAGGGCAAAGTGGACTCGCTGGTGGGTGTGGATGTGGCGGCTGCTTTGGACCTGTATGTGGAGCAGGGCCAGTGGGACAAGTGTGTTGAAACAGCTACCAAGCAGAACTACAAGATTCTGCACAAGTACGTGGCTTTGTATGCAACTCACCTGATCCGAGAGGGTGGCTATGCCCAGGCACTGGCCCTGTATGTGCAACACGGAGCCCCTGCTAACCCACAGAACTTCAACATCTACAGAAGGATCTTCACTGACATGGTGAGCTCCCCTGGGACCAACAGCGCCGAGGCCTATCACAACTGGGCTGACCTTCGGGACGTCCTCTTCAACCTGTGTGAAAACTTGGTGAAGTCCAGTGAGGCAAACTCTCCAGCCCATGAGGAGTTCGAGACCATGCTGCTGATCGCCCATTACTATGCCACTCGCTCTGCGGCCCAGAGCATCAAACAGCTGGAAACTGTGGCTGCCAGGCTTTCTGTTTCACTCTTACGTCACACCCAGCTACTACCTGCAGACAAGGCCTTCTATGAAGCAGGCATTGCTGCCAAGGCAGTTGGCTGGGAGAACATGGCCTTCATCTTCCTCAACCGCTTTTTGGATCTGACAGATGCAATCGAAGAAGGGACTCTGGATGCCCTTGACCACTCTGACTTTCAGGATACAGACATTCCCTTTGAGGTGCCACTCCCAGCCAAGCAGCACATCCCGGAGGCTCAGAGAGAAGAAGTTCGAGACTGGGTGCTCACAATCTCAATGGACCAGCGGTTGGAGCAGGTTCTGCCTCAGGATGAGCGCGGTGCCTACGAGGCTTCCCTGGTGGCGGCCAGCACTGGAGTTCGGGCACTGCCCTGCCTCATTACAGGATATCCCATTCTGAGGAACAAAATTGAATTTAAGCGGCCAGGGAAGGCAGCTAACAAGGACAACTGGAATAAGTTCCTTATGGCCATCAAGACCTCCCACAGCCCTGTGTGCCAAGACGTGCTGAAGTTCATCAGTCAATGGTGCGGGGGACTGCCCAGCACCAGCTTCTCCTTTCAGTAG

Related Sequences

bmy_01090T0 SequenceType object (3)

Length: 1766 aa      View alignments
>bmy_01090T0
MQLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCAVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDPQEREFTTAAASPGGQSVVLGSYDRLRVLNWSPRRSIWEEAKPKEIANLYTITALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLLGDLNTNRLSEVGTKNGEVAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSNDTLGSVRTEFMNPHLISVRINERXQRGMEDNKKLAYLVDIKTIAVVDLIGGYNIGTISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILSFCSYVQWVPGSDVLVAQNRNNLCVWYNIEAPERVTMSSIRGDVVGLERGGGKTEVMVTEGVTTVAYTLDEGLIEFGTAIDDGNYTRAAAFLETLEMTPETEAMWKTLSKLSLEARQLHIAERCFSALGHVAKARFLHETNEIADQVSREYASILLLIRSGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMDMYQELHRWDECIAVAEAKGHPALEKLRRGYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPAKAARLVLTREELLATTELVEHITAALIKSELYERAGDLFEKIRNPQRALECYRKGNAFMKAVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAIYILDLQDQNTASKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFKKHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRSSGLWEEAYRVAKAHGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEFAFELSRLALKHKTPEIHLRYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVTEVLMGQARGALEEKDFQKAEGLLLRAQRPGLALSYYKEAGLWSDALRICKDYMPSQLEALQEEYEREATKKGARGMEGLVEQARQWEQAGEYSRAVDCYLKVRDAGSSSLVEKCWMKAAELSIKFLPPQRSLEVVRAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFLEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVAAALDLYVEQGQWDKCVETATKQNYKILHKYVALYATHLIREGGYAQALALYVQHGAPANPQNFNIYRRIFTDMVSSPGTNSAEAYHNWADLRDVLFNLCENLVKSSEANSPAHEEFETMLLIAHYYATRSAAQSIKQLETVAARLSVSLLRHTQLLPADKAFYEAGIAAKAVGWENMAFIFLNRFLDLTDAIEEGTLDALDHSDFQDTDIPFEVPLPAKQHIPEAQREEVRDWVLTISMDQRLEQVLPQDERGAYEASLVAASTGVRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLPSTSFSFQ*