Part of scaffold_21 (Scaffold)

For more information consult the page for scaffold_21 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FNDC4 ENSTTRG00000012527 (Bottlenosed dolphin)

Gene Details

fibronectin type III domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011886, Bottlenosed dolphin)

Protein Percentage 96.51%
cDNA percentage 96.22%
Ka/Ks Ratio 0.30824 (Ka = 0.0238, Ks = 0.0773)

BT.32315 ENSBTAG00000018164 (Cow)

Gene Details

fibronectin type III domain-containing protein 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041854, Cow)

Protein Percentage 96.77%
cDNA percentage 93.98%
Ka/Ks Ratio 0.0675 (Ka = 0.0147, Ks = 0.2183)

FNDC4  (Minke Whale)

Gene Details

fibronectin type III domain containing 4

External Links

Gene match (Identifier: BACU019958, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.42%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0143)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 804 bp    Location:1923505..1920428   Strand:-
>bmy_01091
GGACAGCGCCACGGAGTCGGGCGATGGGCCGCCCTCTGGGCACCGAGCAGCCCCCCGAGGCCTGAGCGACCGCGAGGACCGGCGGAGGAGCCCCGCCTGGATGTCAAACGGATGCCCCAGTGCCTCCCAGCGGACTCGGTGGGGACCATGGCTTCGCTAATGCCCCTCTCCCCATATCTAAGCCCCACTGTCCTCCTGCTGGTCAGTTGTGACCTGGGCTTTGTACGAGCAGACCGGCCTCCCTCTCCTGTGAATGTGACAGTCACTCACCTCAGAGCCAACTCGGCCACTGTGTCTTGGGACGTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAACGACAGAATGGACCGGGGCAACGTGTGATCCGGGAGGTGAACACCACCACTCGGGCCTGTGCCCTCTGGGGCCTGGCTGAAGACAGTGACTACACAGTGCAGGTCAGGAGCATCGGCCTTCGGGGAGAAAGCCCCCCAGGGCCACGGGTGCACTTCCGGACTCTCAAGGGTTCTGACCGGCTACCTTCAAACAGCTCGAGCCCAGGTGACATCACAGTGGAGGGTCTGGATGGAGAGCGACCTCTGCAAACGGGGGAAGTGGTCATMATTGTGGTGGTGTTGCTCATGTGGGCTGCTGTAATTGGGCTATTCTGCCGTCAGTATGACATCATCAAGGACAATGACTCCAACAATAACCCCAAGGAGAAGGGGAAGGGACCGGAACAGAGTCCTCAGGGAAGGCCAGTGGGGACAAGACAGAAAAACTCACCATCCATCAACACCATTGACGTATGA

Related Sequences

bmy_01091T0 Protein

Length: 268 aa      View alignments
>bmy_01091T0
GQRHGVGRWAALWAPSSPPRPERPRGPAEEPRLDVKRMPQCLPADSVGTMASLMPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSATVSWDVPEGNIVIGYSISQQRQNGPGQRVIREVNTTTRACALWGLAEDSDYTVQVRSIGLRGESPPGPRVHFRTLKGSDRLPSNSSSPGDITVEGLDGERPLQTGEVVIIVVVLLMWAAVIGLFCRQYDIIKDNDSNNNPKEKGKGPEQSPQGRPVGTRQKNSPSINTIDV*