Sequence details bmy_01131 (Coding sequence)

Part of scaffold_22 (Scaffold)

For more information consult the page for scaffold_22 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOX10 ENSBTAG00000004822 (Cow)

Gene Details

transcription factor SOX-10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034563, Cow)

Protein Percentage 99.36%
cDNA percentage 95.58%
Ka/Ks Ratio 0.0077 (Ka = 0.0026, Ks = 0.334)

Additional orthologs identified in other species via the OPTIC pipeline.

SOX10 (Human)   Sox10 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location:528898..539790   Strand:+
Raw sequence 
>bmy_01131
ATGGCGGAGGAGCAGGACCTGTCCGAGGTGGAGCTGAGCCCCGTGGGCTCCGAGGAGCCGCGCTGCCTGTCCCCGGGGAGCGCGCCCTCTCTGGGGCCCGACGGCGGCGGTGGAGGCGGCGGATCGGGCCTGCGAGCCAGCCCGGGGCCCGGCGAGCTGGGCAAGGTCAAGAAGGAGCAGCAGGACGGCGAGGCGGACGATGACAAGTTCCCCGTGTGCATCCGCGAGGCAGTCAGCCAGGTGCTCAGCGGCTACGACTGGACGCTGGTGCCCATGCCCGTGCGCGTCAACGGCGCCAGCAAGAGCAAACCGCACGTCAAGCGGCCCATGAACGCCTTCATGGTGTGGGCGCAGGCAGCGCGCAGGAAGCTGGCGGACCAGTACCCGCACCTGCATAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTCTGGAGGCTGCTGAACGAAAGTGACAAGCGCCCCTTCATTGAGGAGGCCGAGCGGCTCCGGATGCAGCACAAGAAGGATCACCCAGATTACAAGTACCAGCCACGGAGGCGGAAGAACGGGAAGGCGGCCCAGGGAGAGTCAGAGTGCCCAGGCGGGGAGGCCGAGCAGGGCAGTGCTGCTGCCATCCAGGCCCACTACAAGAGCGCCCACCTGGACCACCGGCACCCAGGCGAGGGCTCCCCGATGTCAGATGGAAACCCTGAGCACCCCTCGGGCCAGAGCCACGGCCCGCCCACCCCTCCGACCACCCCAAAGACAGAGCTGCAGTCGGGCAAGGCAGACCCCAAGCGGGATGGGCGCTCCATGGGGGAGGGCGGGAAGCCTCACATCGACTTCGGCAACGTGGACATCGGTGAGATCAGCCACGAGGTAATGTCCAACATGGAGACCTTTGATGTGGCTGAGTTGGACCAGTACCTGCCGCCCAACGGGCACCCGGGCCATGTGGGCAGCTACTCGGCAGCTGGCTACGGGCTGGGCAGCGCCCTGGCTGTGGCCAGTGGACACTCTGCCTGGATCTCCAAGCCTCCAGGTGTGGCTCTGCCCACGGTCTCGCCACCTGGTGTGGATGCCAAAGCCCAGGTGAAGACGGAGACCGCGGGGCCCCAGGGGCCCCCACACTACACTGACCAGCCGTCCACCTCGCAGATCGCCTACACCTCCCTCAGTCTGCCCCACTATGGCTCCGCCTTCCCCTCCATCTCCCGCCCCCAGTTTGACTACTCTGACCATCAGCCCTCAGGACCCTATTATGGCCATTCAGGCCAGACCTCTGGCCTCTACTCGGCTTTCTCCTACATGGGGCCCTCACAGCGGCCCCTCTACACGGCCATCTCTGACCCCAGCCCCTCAGGGCCCCAGTCCCACAGCCCCACACACTGGGAGCAGCCAGTATATACGACGCTGTCCCGGCCTTAA

Related Sequences

bmy_01131T0 Protein

Length: 469 aa      View alignments
>bmy_01131T0
MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGGGSGLRASPGPGELGKVKKEQQDGEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQGSAAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPNGHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQTSGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP*