Sequence detailsbmy_01143 (Coding sequence)

Part of scaffold_22 (SequenceType object (1))

For more information consult the page for scaffold_22 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SH3BP1ENSTTRG00000004791 (Bottlenosed dolphin)

Gene Details

SH3-domain binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004516, Bottlenosed dolphin)

Protein Percentage 95.31%
cDNA percentage 95.88%
Ka/Ks Ratio 0.20178 (Ka = 0.0259, Ks = 0.1285)

SH3BP1ENSBTAG00000030257 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016495, Cow)

Protein Percentage 93.87%
cDNA percentage 93.06%
Ka/Ks Ratio 0.09963 (Ka = 0.0306, Ks = 0.3072)

SH3BP1 (Minke Whale)

Gene Details

SH3-domain binding protein 1

External Links

Gene match (Identifier: BACU000842, Minke Whale)

Protein Percentage 97.55%
cDNA percentage 97.63%
Ka/Ks Ratio 0.14942 (Ka = 0.0124, Ks = 0.0829)

Additional orthologs identified in other species via the OPTIC pipeline.

SH3BP1 (Human)   Sh3bp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1224 bp    Location:806448..796496   Strand:-
Raw sequence 
>bmy_01143
ATGATGAAGAGGCAGCTGCATCGCATGCGGCAGCTGGCCCACACGGGCAGCTTGGGACGCACCCCGGAGACTGCCGAGTTCCTGGGGGAGGACCTGCAGCAGGTGGAGCAGCGACTGGAGCCGGCCAAGCGAGCAGCCCACAATGTCCACAAACGGCTGCAGGCCTGTCTGCAGGGCCAGAGCGGGGCGGACATGGACAAGCGGGTGAAGAAGCTTCCCCTCATGGCTCTGTCCACCACGATGGCCGAGAGCTTCAAGGAGCTGGACCCCGATTCCAGCATGGGGAAGGCCTTGGAGATGAGCTGTGCCATTCAGAACCAGCTTGCCCGCATCCTGGCCGAGCTTGAGATGACCCTGGAGCGGGACGTCCTGCAGCCGCTCAACAGGCTGAGTGAGGACGAGTACTTGGCCGATCTGTACCACTTTGCCACCAAGGAGGACACCTATGCCAACTACTTCATCCACCTCATGGAGATTCAGGCCGATTACCATCGCAAGTCTCTGAGCTCGCTGGACACGGCCCTGGCTGAGCTGAGGGAGAACCACAGCCAAACAGACCCCTCCCCCTCGATGATGGCCGCCCCCTTCTCCAGGGTGTATGGGGTGCCTCTGGGAACCCACCTGCGAGAGCTGGGCCGGGACATCGCCCTGCCCATCGAGGCCTGCGTCATGATGCTGCTTTCTGAGGGCATGAAGGAAGAGGGCCTCTTCCGTCTGGCCGCCGGGGCCTCAGTGCTGAAGCGCCTCAAGCAGACAATGGCCTCGGACCCCTGCAGCCTGCAGGAGTTCTGCTCTGACCCCCACGCTGTGGCAGGTGCCCTCAAGTCCTACCTGCGGGAGCTGCCGGAGCCCCTGATGACCTTTGACCTCTATGATGACTGGATGAGGGCAGCCAGCCTGAAGGAGCCAGGAGCCCGCCTGGAGGCCCTCCAGGAGGTGTGCAGCCGCCTGCCCCGTGAGAACCTCAGCAACCTCAGGTACCTGATGAAGTTCCTGGCACGGCTGGCCGAGGAGCAGGAGGTGAACAAGATGACACCCAGCAACATCGCCATTGTCCTGGGGCCCAACCTGCTGTGGCCCCCTGAGAAAGAAGGGGCAGAGTCTGAGGCACCCCCCAGACCAGCCTCCCCCAAGGTCAGTAGAAGCTCCCTGGAGGCAGCCGCCCCAACAGAGGACATGGCTCGGAGGAGTGAGTTGGCTGTGGGAGGAGAAGGGGGGCAGAGG

Related Sequences

bmy_01143T0 SequenceType object (3)

Length: 408 aa      View alignments
>bmy_01143T0
MMKRQLHRMRQLAHTGSLGRTPETAEFLGEDLQQVEQRLEPAKRAAHNVHKRLQACLQGQSGADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAELEMTLERDVLQPLNRLSEDEYLADLYHFATKEDTYANYFIHLMEIQADYHRKSLSSLDTALAELRENHSQTDPSPSMMAAPFSRVYGVPLGTHLRELGRDIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPCSLQEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLEALQEVCSRLPRENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGAESEAPPRPASPKVSRSSLEAAAPTEDMARRSELAVGGEGGQR