Part of scaffold_22 (Scaffold)

For more information consult the page for scaffold_22 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GGA1 ENSTTRG00000004782 (Bottlenosed dolphin)

Gene Details

golgi-associated, gamma adaptin ear containing, ARF binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004510, Bottlenosed dolphin)

Protein Percentage 98.11%
cDNA percentage 98.22%
Ka/Ks Ratio 0.13786 (Ka = 0.0085, Ks = 0.062)

GGA1 ENSBTAG00000006464 (Cow)

Gene Details

ADP-ribosylation factor-binding protein GGA1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008477, Cow)

Protein Percentage 95.43%
cDNA percentage 93.74%
Ka/Ks Ratio 0.07094 (Ka = 0.0215, Ks = 0.3032)

GGA1  (Minke Whale)

Gene Details

golgi-associated, gamma adaptin ear containing, ARF binding protein 1

External Links

Gene match (Identifier: BACU000843, Minke Whale)

Protein Percentage 99.21%
cDNA percentage 98.95%
Ka/Ks Ratio 0.0786 (Ka = 0.0033, Ks = 0.0421)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1911 bp    Location:832856..812914   Strand:-
>bmy_01144
ATGGAGCCTGCGATGGAGCCGGAGACTCTGGAGGCGCGAATCAACAGAGCCACAAACCCCCTGAACAAGGAGCTGCACTGGGCCAGCATCAACGGCTTCTGCGAGCAGCTCAACGAGGACTTTGAGGGGCCTCCACTTGCCACCCGGCTGTTGGCCCACAAGATCCAATCCCCGCAGGAGTGGGAGGCGATCCAGGCCCTGACGGTGCTGGAAACATGCATGAAGAGCTGCGGCAAGAGGTTCCACGACGAGGTGGGCAAGTTCCGCTTCCTCAACGAGCTCATCAAGGTCGTGTCTCCCAAGTACCTGGGCTCTCGGACATCGGAGAAGGTGAAGAACAAGATCTTGGAGCTTCTCTACAGCTGGACGGTCGGCCTCCCTGAGGAGGTGAAGATCGCAGAGGCCTACCAGATGCTGAAGAAGCAGGGGATTGTGAAGGCCGACCCCAAGCTTCCAGATGATGCCACCTTTCCCCTTCCTCCGCCACGGCCCAAGAATGTGATCTTTGAAGACGAGGAGAAATCCAAGATGCTGGCCCGCCTGCTGAAGAGCTCCCACCCCGAGGACCTCCGAGCAGCCAACAAACTCATCAAGGAGATGGTGCAGGAGGACCAGAAGCGAATGGAGAAGATCTCGAAGCGGGTGAGCGCCATCGAGGAGGTGAACAACAACGTGAAGCTGCTGACGGAGATGGTGATGAACCACAGCCAGGGCGGCGCGGCTGCCCAAAGCAGTGAGGACCTCATGAAGGAACTGTACCAGCGCTGTGAGCGCTTGCGGCCCACGCTCTTCCGACTGGCCAGCGACACGGAGGACAATGACGAGGCCTTAGCTGAGATCCTGCAAGCCAACGACAACCTCACCCAGGTCATCAACCTGTACAAGCAGCTGGTGCGGGGCGAGGAGGTCAACGGCGATGCCACAGCCGCCTGCATCCCTGGGAGCACCTCGGCCTTGTTGGACCTCTCAGGTCTGGATCTCCCTCCGGTGGCCACCACTGACCCAGCCACGCCCACCTGCCCTGGTGACCAGGCCAGCCTGGAGCAGCCCAGCACCTCAGTTTCCCTACTTGACGATGAGCTCATGTCTCTGGGCCTAAGCGACCCCACACCCCCTTCAGGCCCAGGCTTGGATGGTGCTGGGTGGAACAGCTTCCAGTCGTCTGATGGCACTGAGCCCCCCCACCCCACTCCGGCCCCCAGCGTGGACAGTCGGCCCCCGGCGCAGACGTCCCTGCCCACGAGCAGTGGTCTGGATGACTTGGACCTCCTGGGGAAGACCCTCCTGCAGCAGTCGCTGCCCCCGGAGTCCCAGCAAGTGCGGTGGGAGAAGCAGCAGCCAGCGCCCCGGCTCACACTCCGGGACCTGCAGAATAAAAGCAGCTGCAGCTTGTCCAGCTCCGGCGCCACCAGCCTCCTCCACACCATGTCCCCCGAGCCCCCTGGGCCCCTGCAGCAGCCCACACCGACGGAGCTCTCGCTGGCCAACATCACTGTGCCTCTGGAGTCCATCAAACCCAGCAGCATCTTGCCAGTGACCGTGTATGACCAACATGGCTTCCGGGTCCTCTTCCACTTCGCCCGAGACCCACTGCCCGGGCGCTCCGATGTGCTGGTGGTGGTGGTTTCCATGCTGAGCACCGCCCCACAGCCCATCCGCAACATTGTTTTCCAGTCAGCTGTCCCCAAGGTCATGAAGGTGAAGCTGCAGCCGCCCTCAGGCACAGAGCTGCCAGCATTTAACCCCATCGTCCACCCCTCAGCCATCACCCAGGTCCTGCTCCTTGCCAACCCCCAGAAGGAGAAGGTTCGTCTCCGCTACAAGCTGCTCTTCACCATGGGCGACCAGACCTACAACGAGATGGGGGACGTGGACCAGTTCCCCCCACCGGAGACCTGGGGGAGCCTCTAG

Related Sequences

bmy_01144T0 Protein

Length: 637 aa      View alignments
>bmy_01144T0
MEPAMEPETLEARINRATNPLNKELHWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKIAEAYQMLKKQGIVKADPKLPDDATFPLPPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVSAIEEVNNNVKLLTEMVMNHSQGGAAAQSSEDLMKELYQRCERLRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAACIPGSTSALLDLSGLDLPPVATTDPATPTCPGDQASLEQPSTSVSLLDDELMSLGLSDPTPPSGPGLDGAGWNSFQSSDGTEPPHPTPAPSVDSRPPAQTSLPTSSGLDDLDLLGKTLLQQSLPPESQQVRWEKQQPAPRLTLRDLQNKSSCSLSSSGATSLLHTMSPEPPGPLQQPTPTELSLANITVPLESIKPSSILPVTVYDQHGFRVLFHFARDPLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLLFTMGDQTYNEMGDVDQFPPPETWGSL*