Sequence detailsbmy_01145 (Coding sequence)

Part of scaffold_22 (SequenceType object (1))

For more information consult the page for scaffold_22 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGALS2ENSTTRG00000004779 (Bottlenosed dolphin)

Gene Details

lectin, galactoside-binding, soluble, 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004500, Bottlenosed dolphin)

Protein Percentage 88.55%
cDNA percentage 94.91%
Ka/Ks Ratio 1.06245 (Ka = 0.0542, Ks = 0.051)

LGALS3ENSBTAG00000021615 (Cow)

Gene Details

galectin-2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028802, Cow)

Protein Percentage 85.12%
cDNA percentage 89.81%
Ka/Ks Ratio 0.36161 (Ka = 0.0842, Ks = 0.233)

LGALS2 (Minke Whale)

Gene Details

lectin, galactoside-binding, soluble, 2

External Links

Gene match (Identifier: BACU018940, Minke Whale)

Protein Percentage 98.45%
cDNA percentage 99.22%
Ka/Ks Ratio 0.51981 (Ka = 0.0066, Ks = 0.0126)

Additional orthologs identified in other species via the OPTIC pipeline.

LGALS2 (Human)   Lgals2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 396 bp    Location:846546..852399   Strand:+
Raw sequence 
>bmy_01145
ATGTCGGGGAAATTTGAGATTATGAACATGGACATGAAGGTGGGGACAACCCTGAAGATCAAGGGCAAGATCGCAGATGATGCTGATGGCTTTGTGATTAATCTGGGCCAGGGGACAGATAAACTGAACCTGCATTTCAACCCACGTTTCGGTGAATCCACCGTCGTCTGCAACTCACGGGATGGCAACAGCTGGGGGCAGGAGCAACGGGACAGTCACATGTGCTTCAGCCCGGGATCAGAGGTCAAGCTCCTCGTGACCTTCGAGAACGACGAATTCAAGGTGAAGCTGCCAGACGGGCACCAGTTGACCTTTCCCAACAGGCTGGGCCATGACCACTTGAGCTACCTGAGTGTGCAGGGCGGGTTCAACATCTCCTCCTTCAAGCTAGACTGA

Related Sequences

bmy_01145T0 SequenceType object (3)

Length: 132 aa      View alignments
>bmy_01145T0
MSGKFEIMNMDMKVGTTLKIKGKIADDADGFVINLGQGTDKLNLHFNPRFGESTVVCNSRDGNSWGQEQRDSHMCFSPGSEVKLLVTFENDEFKVKLPDGHQLTFPNRLGHDHLSYLSVQGGFNISSFKLD*