Sequence detailsbmy_01146 (Coding sequence)

Part of scaffold_22 (SequenceType object (1))

For more information consult the page for scaffold_22 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDC42EP1ENSTTRG00000004775 (Bottlenosed dolphin)

Gene Details

CDC42 effector protein (Rho GTPase binding) 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004495, Bottlenosed dolphin)

Protein Percentage 71.23%
cDNA percentage 74.12%
Ka/Ks Ratio 0.69057 (Ka = 0.0394, Ks = 0.0571)

Additional orthologs identified in other species via the OPTIC pipeline.

CDC42EP1 (Cow)   CDC42EP1 (Human)   Cdc42ep1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1086 bp    Location:855937..852556   Strand:-
Raw sequence 
>bmy_01146
ATGCCGGGCCCCCAGGGGGCCGGAGGAACCCCGGCCATGAACCTGGGCAAGCTCTCACCCGTGGGCTGGGTGTCCAGCTCGCAGGGGAAGAGGCGGCTGACTGCGGACATGATCAGCCCCCCACTGGGGGACTTCCGCCACACCATGCACGTGGGCCGTGGCGGGGATGTCTTCGGCGACACCTCCTTCCTCAGCAACCACGGTGGCAGCTCACGGGGCACCCACCGCTCGCCCCGCAGCTTCCTGGCCAAGAAGCTGCAGCTGATGCGGAGGGTAGGGGCACCGCCCCGGAGGATGGCTTCCCCACCTGCGCCCTCACCTGCTCCACCGGCCATCTCCCCCATCATCAAGAACGCCATCTCCCTGCCTCAGCTCAACCAGGCCGCCTACGACAGCCTCGTGGTAGGCAAGCTCAGCTTCGACTGCAGCCCTGCCACCTCCACAGACGGCCACTCCAGTTACGGCCTGGACTCCGGGTTCTGCACCATCTCTCGCCTGCCTCGCCCAGAAAAGCCTCGTGACCGAGACCGTGATAGCTCCTTCCCCTCTGAGCCTGAGCTTCGCCGCTCTGACTCCCTCCTGTCCTTGCGCCTGGACCTCGACCTTGGGCCCTCTCTCCTCAGTGAGCTGCTGGGGGTCATGAGCCTCTCAGAAGGCTCTGCAGTCGAGACCCCAGCCCCACCCCCTGCTGCAAATCCCCCAGCCCCTGTTGCAAACCCCCCGACCCCTGCCTCAAGCCCCCCACCCCGTGGACAGTGCCCCAATGGGGTAACCCCGGGGTTGGGCCCAACGGCCGAGGCGACGGCCAGCCCGGTAGGAGAGCGTCCCTGTGCACCTGCTGACGTGGGCCCCGGCAGGCACTGGGGAGCAGGCTGGGGTGGCAGCCAAAGCAGCCGCCACTACACTGAGATGGATGCTCGGCGGGAGCTGGTGGAGGTGCTGCCCCAGGCTCGGGCCTCTTGGGAGAGCCTGGACGAAGAGTGGGGGCCACCGCAGGCAGGCAGCAGGGCCTCCGTGCCCAGCACGGTGCAAGCCGACACCTTCAAGTTTGCTGAAGCTGAGGAGGATGACGAGGTCAAGGTGTGA

Related Sequences

bmy_01146T0 SequenceType object (3)

Length: 362 aa      
>bmy_01146T0
MPGPQGAGGTPAMNLGKLSPVGWVSSSQGKRRLTADMISPPLGDFRHTMHVGRGGDVFGDTSFLSNHGGSSRGTHRSPRSFLAKKLQLMRRVGAPPRRMASPPAPSPAPPAISPIIKNAISLPQLNQAAYDSLVVGKLSFDCSPATSTDGHSSYGLDSGFCTISRLPRPEKPRDRDRDSSFPSEPELRRSDSLLSLRLDLDLGPSLLSELLGVMSLSEGSAVETPAPPPAANPPAPVANPPTPASSPPPRGQCPNGVTPGLGPTAEATASPVGERPCAPADVGPGRHWGAGWGGSQSSRHYTEMDARRELVEVLPQARASWESLDEEWGPPQAGSRASVPSTVQADTFKFAEAEEDDEVKV*