Part of scaffold_22 (Scaffold)

For more information consult the page for scaffold_22 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TOM1 ENSTTRG00000011365 (Bottlenosed dolphin)

Gene Details

target of myb1 (chicken)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010776, Bottlenosed dolphin)

Protein Percentage 86.21%
cDNA percentage 87.09%
Ka/Ks Ratio 0.30242 (Ka = 0.0304, Ks = 0.1005)

TOM1 ENSBTAG00000045785 (Cow)

Gene Details

target of Myb protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013932, Cow)

Protein Percentage 91.87%
cDNA percentage 91.87%
Ka/Ks Ratio 0.14835 (Ka = 0.0435, Ks = 0.2931)

TOM1  (Minke Whale)

Gene Details

target of myb1 (chicken)

External Links

Gene match (Identifier: BACU000881, Minke Whale)

Protein Percentage 98.43%
cDNA percentage 99.02%
Ka/Ks Ratio 0.29138 (Ka = 0.0067, Ks = 0.023)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1533 bp    Location:2745737..2701504   Strand:-
>bmy_01182
ATGGACTTTCTCCTGGGGAACCCGTTCAGCTCTCCAGTGGGACAGCGCATCGAGAAAGCTACAGATGGCTCCCTGCAGAGCGAGAACTGGGCACTCAACATGGAGATCTGCGACATCATCAATGAGACCGAGGAAGGTCCCAAAGATGCCTTCCGAGCAGTGAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATGTTGGCTCTCACGGTCTTGGAAACCTGCGTCAAGAACTGCGGGCACCGCTTCCACTTGCTGGTGGCCAGCCAGGACTTCGTGGAGGGCGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCGCCCACCATCGTGCACGACAAGGTGCTCACCCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGACTTGACAGGTGTGGTCGCTGTCTACGAGGACCTGCGGAGGAAGGGCCTGGAGTTCCCCATGACCGACCTGGACATGCTGTCCCCCATCCACACGCCCCAGAGGACCGTGTTCAACTCAGAGACACCGTCAGGACAGAATTCTTCTGTGGGCACTGATGCCAGTCATCAAGGGGACTCCGGCCAGCACACCACCCCGCTGCCCACCGTGGCCCTACTCCCCAGTGACACACCCATAATGCCAACCGCTGAGCAGATCGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACGTGAGGGTGATGTCGGAGATGCTGACGGAGCTCGTGCCCACGCAGGCGGAGCCGGCAGACCTGGAGCTGCTGCAGGAGCTCAACCGGACGTGCCGGGCCATGCAGCAGCGGGTCCTGGAGCTCATCCCCCGCGTCGCCAGTGAGCAGCTGACCGAGGAGCTGCTCACCGTCAACGACGACCTCAACAACGTCTTCCTGCGCCACGAACGGTTTGAACGCTTCCGAACAGGCCAGAACGCCAAGGCCCCAAGCGAGGCCGAGGCAGCCGCTGACCTGATCGACATGGGCCCTGACCCTGCAGCCACCAGCAGCCTCTCGTCCCAGCTGGCGGGAATGAACCTGGGCTCCAGCAGCATGAGGGCTGGCCTGCAGTCTCTGGAGGCCTCTGGCCGCTTGGAAGATGAGTTTGACATGTTTGCGCTGACGCGGGGCAGCTCGCTGGCTGACCAACGCAAAGAGGTAAAATACGAAGCCCCTCAAGCAACAGATGGCCTGGCTGGAGCCCTGGATGCCCGGCAGCAGAGCACCGGAGCGATCCCCGTCACCCAGGCCTGCCTCATGGAGGACATCGAGCAGTGGCTGTCCACGGACGTGAGGAGGGCCCGGCCCCGCACCCCTCGCAGCCTCTGGGGCCTCCGCTTCCCCGAGCCTGCTGCCGATCGAGGTCCCACTGTGGGCAGGACAGAATTTGACAAGTTCCTGGAAGAACGAGCCAAAGTGGCCGACCGTTTGCCCAGCCTCTCCAGCCCCTCAGCCGAGGGGCCCCCGGGTCCCCCGCCTGGCAGTGCCCCTCGAAAGAAGACCCAGGAGAAAGATGACGACATGCTGTTTGCCTTATGA

Related Sequences

bmy_01182T0 Protein

Length: 511 aa      View alignments
>bmy_01182T0
MDFLLGNPFSSPVGQRIEKATDGSLQSENWALNMEICDIINETEEGPKDAFRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHLLVASQDFVEGVLVRTILPKNNPPTIVHDKVLTLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSGQNSSVGTDASHQGDSGQHTTPLPTVALLPSDTPIMPTAEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPRVASEQLTEELLTVNDDLNNVFLRHERFERFRTGQNAKAPSEAEAAADLIDMGPDPAATSSLSSQLAGMNLGSSSMRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGALDARQQSTGAIPVTQACLMEDIEQWLSTDVRRARPRTPRSLWGLRFPEPAADRGPTVGRTEFDKFLEERAKVADRLPSLSSPSAEGPPGPPPGSAPRKKTQEKDDDMLFAL*