Part of scaffold_22 (SequenceType object (1))

For more information consult the page for scaffold_22 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ISXENSTTRG00000011357 (Bottlenosed dolphin)

Gene Details

intestine-specific homeobox

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010765, Bottlenosed dolphin)

Protein Percentage 88.44%
cDNA percentage 91.33%
Ka/Ks Ratio 0.53839 (Ka = 0.0782, Ks = 0.1452)

BT.63602ENSBTAG00000007674 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010095, Cow)

Protein Percentage 74.86%
cDNA percentage 82.7%
Ka/Ks Ratio 0.59948 (Ka = 0.178, Ks = 0.2969)

ISX (Minke Whale)

Gene Details

intestine-specific homeobox

External Links

Gene match (Identifier: BACU000884, Minke Whale)

Protein Percentage 98.94%
cDNA percentage 98.77%
Ka/Ks Ratio 0.39916 (Ka = 0.0091, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 570 bp    Location:2924997..2917420   Strand:-
>bmy_01184
ATGAGTAAAAAGGAGAGGAAGGGCAAGCGGAGGATCCGAACCACCTTCACCACAGAGCAGCTGCATGAGCTGGAGAAGATCTTCCACTTTACCCACTACCCTGATGTCCACGTCCGCAACCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCGGGTACAGATCTGGTTCCAGAATCAGCGAGCCAAGTGGCGGAAGCAGGAGAAGACCAGCAGCCTTGGGGCTTCGCCGCAGCCGAGCGAGGCCGACTTGGCCCCGCCCACAAACCCGGACGTGGTCGGCCCCATGCTGCTGCCCCCTGCACGGCCCAGGCTGGCTCCTCCCATAGGTTGGTATCCACCGGCTCAAGGTCAGCTGGCCTCTGCCTGGCTCCCTGCCCGGATCGCCCTCCTCCCATGCCACCCATGGGAGACACAGCCTCTCCCGGGCCCTCTCATCATCCAGCAGACCTGCATCCCTGCACTTTGCTTTTTTTGCACCTCTGCACCCCAAATGGGGCAACATCTGTGCCACTTCCACACAGGGACCAGACATCCTCTCCTTAGTGGAGCTGCTCTCTTCTCCAGGTGA

Related Sequences

bmy_01184T0 SequenceType object (3)

Length: 190 aa      View alignments
>bmy_01184T0
MSKKERKGKRRIRTTFTTEQLHELEKIFHFTHYPDVHVRNQLAARINLPEARVQIWFQNQRAKWRKQEKTSSLGASPQPSEADLAPPTNPDVVGPMLLPPARPRLAPPIGWYPPAQGQLASAWLPARIALLPCHPWETQPLPGPLIIQQTCIPALCFFCTSAPQMGQHLCHFHTGTRHPLLSGAALFSR*