Part of scaffold_23 (Scaffold)

For more information consult the page for scaffold_23 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

URB1 ENSTTRG00000007712 (Bottlenosed dolphin)

Gene Details

URB1 ribosome biogenesis 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007297, Bottlenosed dolphin)

Protein Percentage 84.12%
cDNA percentage 85.33%
Ka/Ks Ratio 0.38308 (Ka = 0.0288, Ks = 0.0751)

URB1 ENSBTAG00000012412 (Cow)

Gene Details

nucleolar pre-ribosomal-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016473, Cow)

Protein Percentage 81.11%
cDNA percentage 83.99%
Ka/Ks Ratio 0.25614 (Ka = 0.1202, Ks = 0.4694)

URB1  (Minke Whale)

Gene Details

URB1 ribosome biogenesis 1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU010388, Minke Whale)

Protein Percentage 96.28%
cDNA percentage 97.37%
Ka/Ks Ratio 0.47534 (Ka = 0.0215, Ks = 0.0453)

Genome Location

Sequence Coding sequence

Length: 6351 bp    Location:99334..36976   Strand:-
>bmy_01196
ATGGGGGGCCCCAAGAGGAAGGCCCCGGGCGGCCCGGACGGCTCGGCTCCCCCAGCGGGCGCAGCCAAGCGGGCCCGCACCGAAGAGCTCACGGGCGTGCGCTTCAAGGCTCAGCTGAGGGACCCGCAGGGCGCTGGGCCAGCCTTGGAAGCCTTTGTTTCTGCGGCCAAGAAGCTGCCACGAGAAGATGTGTATGATGTCGTGGAGGGGTACATAAAGATTTCTGTTGAGTGTGCAGAGATTTTCCAGCTCCTGAGTGGGGAGAAGCACCCTGAAAGTGAAATGCTTTTAATATTTCAAGTTTTCGAGGCCATATTATTGCGGACAGCCAGTGATCTTTCCCATTTTCGTGTGGTGGGAACCAACATCGTGAAAAAGCTAATGAATAACCACATGAAGCTCATCTGTGAGTCCCTGTATGCTTCRGGTTACAGGATGGCTCGAGCCTGCCTGAACCTGATGGCCGCCATGGTGACCCAGGGTCCCGAGGCTGCCAGGGACGTCTGCAGCCATTTCGATTTGAATAAAAAGACCTTGTACACGCTGGTGACCAAGAGGGATTCAAAGGGAGTGCATGACGTCCGGCTGGCCTACATTCAGTTCGCTCTTTCCTTCTTGATCGCAGGCGATGACAGCACAGTCGCACAAGTGCTGGAGTTGAAAGAATTTATTCCTTGCATTTTTAGCTCAGGCATGAAGGAAGATAGGATCTCTACTGTCAATATTTTGTTATCCACACTGAAAACAAAGGTAGTTCACAATAAAAATATCACAAAAACCCAGAAGGTGCGTTTCTTTACGGGGCAAGTGCTGAACCACATAGCGTCTCTGTACAGCTGGAAGGGGATTGTCGACGTGAGCCTGGAGAATGTCGAGACTTCTGCTGAAGACGCAGGGAAAACCATGGTGAGGGAGCTTGTTCATAACTTCCTGATGGATCTCTGCTGTTCGCTCAAGCATGGGATTAATTTTTATGACGCGTCTCTTGGTACCTTCGGCAGAGGAGGAAACCTGACGCTCCTGCACTTCCTGCTGGGTTTGAAAACTGCAGCAGACGATGAGCTGGTCGCTGAACTTGTGGTGAACATCCTGAAAGTGTGCCCAGACTTACTGAACAAGTACTTCAAGGAAGTGACGTTCTCCTTTCTCCCAAGGGTGCAGTCCACTTGGTCCAGTAACATCAAGCTGCTAAACAAGATCTATGCCGCCCAGCCAGACATCTCCCGGGCATTTCAGACCAGAGAGTTCATCCCGCTGCCTCGGCTCCTGGCAATGGTGATGGTGACCACCGTGCCCCTGGTGTGCAATAAGATCATGTTCACCCAAGCACTGAATCTGGACAGCAAATCAGTGAAACACACAGCTTTATCCCTTATTTCCGTCATTTTGAAGAGAGCCTCAAAGACTATCGACTACTGCCTGAATAAAGGGGCCTGGCAGGAGTCGGGCGTGTACACGGCCGCGATGATGGAGGACTTTGTGCGGCTCTTCAGAGAAGCCCTGAGCAAGATTTTACCAGACCTGAATGCCATCGTGTGGGTCTGGCAGTCACTTAGGAAGCAGGAGACAGAACAGGATGACGAGAAAGCGAAGAAAAGGGGCAACAAGACCCCTGCTACCTGCGTGGCTCCCCAGAGCGATGATGCAGAAACCATTCTTCTGAAAGCCATCCTGCTCCAGGTCATCTGCCTCTACCAGAAGGTGGTCCCGCACGTGGTCATGCAGTACAACTTTGACTTCAGCAAGCTCCTGAAAGGCGTCATCTCAGAGGAGGGCCTGCGTGAGGAGGTGCCTCTCACCCTGCAGCACCTTGTTCTCAAGGTGGCCCTGGCACTGCCTGCCAGCAAGTTTCTGTGGTTAAAGGCCCAGGAAGGCCCAGATGCAGAAATTATTGGAGGAAAGCGATCCGTGTTTTACTTACTGATGAAGATGTTTGTGACCAGTAGCCATTCGCATCTCAAGTCATCAACCAAACTTCTGATCGTGAAGATCCTGCGGGACACAGGGTTGTTTGAGCACACCTGGCAGGAGCTGGAGCTGTGGCTGGAGCACCTGGATGACACCGCGGAGGAGAACAAGGAGGCCGTGATTCAGTTTTTGGAACGCGTTCTCCTGACATTGGTGGCGAATCCCTATTCATACACGGACAAAGCGTCCGACTTTGTCCAGGAAGCCAGCGCCCTGCAGGCCTCCGTGACGCGGCAGGACGCCGATGATGTCAGCATTCCCATCTCCCACATTGACGATGTTCTCGACATGGTGGATGTCCTGGTAGAGGGCAGCGAAGGCTTGGATGAGGAGGTTGGATTCTTACTGAATGAAGACGTGATCCTGCTCACATTCCCGTTCAGTGCTGTGGTCCCCGCTGCCCTGGAAGCCAGGAATAAGTTGCTCCTTGGAACAGAAAGTGAAGCAGGAGAAAGCATCGTGGCGTATCTGACACGGGTGCTGACGGACCTCCTCCACACCCAGAGAGACCCGCTGGCTCTGTGTCTTCTGCTTCAGTCTTACGACAAGTTGGAGCCTCCGCTCCCACCTTGCTGCCGTCAGCTGTCCAGGTTCAACAGATACTACAGCCTCTGGATCCCGGAGCCAGCCCGAGAGGCCTTGGCGTTGCAGACGTCGGGCAGCCCTGCCCCGCCGGACCCCCCAGCCCCCTCCTTCAGTGCCCTGCTGCAGATGGCCTACGCCGGCCAGGGCCAAGGTCAGGGCCAGGGCCAGGGCCAGGGCGCACTCCCGCTCCTGGACGAGGGGGTCCAGGGGCAGCTGCGGGCTGCCCTCCTGCAGCTCCCGATGCACCAGGCCCTGCGCTCCGCCAAACACCTGCTGCTGTACATCAGGAGCGCCGTGGAGAACTTCGGCCAGCTGGGCAGGAGGACGGGGCCTCCCCTGCTGCAGTTCCTCCTGGACCTCCTCAGGCGCCTGGTCATCCATTGTCAGCAGCTGGACGCCCAGAACCAGCAGAAGTGCCAGGCCGCCCAGGCTGAGTCCGACCTCTTTTTGGACGTGGAGTCCATGGCCTCGCTGGAGTTGGCCAATGACAAGGCTGCATTCATCAGATTCCTGCTGGTCTGGGGGTCACTGACTGAGTCACAGTCTGGGCCCCATCGTTGTACAGGGGAGGAGGTGCGTTACGATGGGACGCTGGAGGAGGTGCTCGTGGCCATCCTCAAGCATCCCACGCTGGAGGGCTGGTACCTGGCCCTGGAGCAACAGGCGCTTCCCCCGCACACCCTCAGTCCCGTCCTCGTGAAGCTCCTGGCGGCCCACCTCAGCGCGGCCATCCTTCCGCTGCTGGTGGCGAGCGCCCCAGTCCTCCAGGGCCTTGGTCAGCTGGGCCTCCTGGCCAGGTACTCGGAGGCCGTCACCCAGAGTGTCCTGAAAGAGCTGCAGAACCGGAGGGCCCGCGCAGCCACGCCGATGCCAAAGACCCTTCCTCAGCTCGAAGCCCTGCAGGGGCTGCACCCGTACATGGAGGGCGCCCAGCTCCGGGAGGTCACCCTGGCCCTGCTGGGCCTGCCCGAGGCCCACCTGGTGACCCAACGACCCACTAAGTCCCGCCAGAAGGAGAGGCACCTGAACGTTCTCGGGGAGACCCTGGTCCAGCTGCTGACCAGCCACCCCCAGGAGCAGCTGGAGAGCGGCGAGCTCCTCTGGGCCTCCGAGTACGTGAGAGGCCTGGGGGCTCTGCTGCCCGCGCTGGCTGTGGACGAGCTGGACGCCGTGCTCCTCCAGGCTCTGCAGAGAGAGCCGGCTCTGGCCCCCGCCGTCGGGGTCGCTCTGCTCGACTACTGCCTGGCCCGGCGGACGCCGGCGGCCCTGGGCACCGCGGCCCTACTCCTGCAGCACAGCTGTCCCCACGTGCTGCGGTTTGAGCGGTGGTGCGGGCGGGCCAGCCTGGGGCTCCGCCTGCAGGAGGCCCTGGACGACTTCCTCCCTGTCGTCCGCACGTACCTCCAGCGCAGGACCCGGGAGCACTTCACGCGCCCCGCAGGAGTATCCTCTGCTGTCATTCCTGTCTTGAGGAAGGCCCTGTGGAGGCCGCTGCAGACCAGGCTTCTCAGTGCTGATGGGCCCCTAGAGTCTGGGCTGCATCAGGAGATCCTGGCCCAGCTGGTCCCATTTGCAAGAGCCAAGGACCTCCATGTCCTCATGGACCGATTGCCCCGCTTGCTTCAGACTCCAGGCAGTCACAAGAGTTGGGTCGTGGCTGACTCTGTCTTGGCTGTCCTGGAAGGGTCGGCAGAAGAGCTGCGTGCTTGGAAAAAGACTCTGCTGGAGGCCTGTGTACAGTGGCTGATCGCGTCCTTTAGCGGCGGCCAGCAGGATGATGGTACCCAGGATCGAGAGAAGCAGATGCTGCTAAGATTAAACGAACTGTTGAATTCACTTAATGAAGTTGATCCTGGTGACTGGCAGAAATTTGTGAAGACTGGACTCAAATTTCGGTATCAGGACCATGCATTTTTAAAGACCCTTCGTGCTGCCGTACAGCTCCTGTATCTCCCGGAAAGCGCCGCGCGCTCGCGGCTCACCCAGCTCTCGGTGGTCCACATGATGCTCACCCAGCACTCCCTGTTCCTGCCCACTTTGCTGACGGCTGGAGAGGAGGAAACCCCAGGCAGTCCCATCAGAGAAGCGCTGGTGGACCTGATGTCGGTGGCAGTGAGGCTGTGTCCCTCTGTCTGCGAGAGCAGCCACTTCGCCGTGCTCCTCGGGGCCTACGGAGCCTCTCTCAGCGTCCTGGACCAGAAGATCTTACTTCTCCTGCGGGCCTACGAACAGAACAACCATAGCCTGGTCAACTTCAGGCTGCTGCCCTGGGGCCCAGCGGCTGTGGAGCATCAGAAGACGTGCCAGAGCCTGGGCAAGTCACTGTGGCAGCAGCCGAGCGTCGGGGACATCCTCCGCCTGCTGGATCCGGACCGCATGATGAAGACTGTCCTCCACTTCCCCCAGAACCGGAGGCTGCTGCCCCCCGAGGACACACAGGAACCGATATTTAAAGACAGGAGCACGATGGAGCTCAGTGACCTTTATGACCCCTGTTTCCTCCTCCATCTCTTCAGTGAATTGACCAGGCCAGAATTTGTGGTGGATTGTCGGAAATTTGTGGATTCAAATGCTCTGGGCCTAACTGTCACAGCCCTCAGCAGCTACGACCCCCCGATGCGAGCCGCGGCCTACTCCGTGCTGGCAGCCTACTACTCACAGCTGGAGGGGGCACGCTTCCGGGAGCAGCCCCAGGTGCTGTACCTGTTGGACGTAGTCCGGAACGGCATCCGAACTAAGAACATGAGACTCACCTTCACCTTGACTCTCTTCATCGCCAAAGCAGCCTTGCAAATTTTGAGACCAGTTTCCTGGTTGCTTGGGTTACAGCAGAAGACGGAGCGGGAGTGGATGTTCGGGCTTCTGCGCCAGGGCATGCGGGACAAGTACTGCTACCAGCTGTGCGCCCGGCGGGGCGTCCTCCACATCGTCCTGTCCTTCTTCAGCAGCCCGCTCTGCGACGACGTGGCCCAGAATTGGATTTTGGAAATTCTGCAGAATGCTGCCCGGGATGCCAAATCTGCCTATGAGATCCTGCGGGATTACAGCCTCTTAACGTGGATCCTACACATCCTGGAGAGCAAGTTCCTGGAGACTCAGCTGCTCTCCAACCTCATCTCCCTGCTGCACACGCTGTGGGTGACCACCCTGGGGGACAGAGGCGTGGAGGCAGGGGAGCAGCCTCCTTGCAAGCCTGGGTCCCAGGAGCCCCCGAAGCTGCTCGCCCTGCACTTGGTCGACGAGTTCCTCTACGTTCTCCTCGTGCTCACGAAGCACCTGAGGGTGGAGCTCAGACTCCGGTCCCCGTTCTGCCTCCCCTGGAGGGGCTCCCTGTTTCCTGCGCTGTGCGCTGGGCTCCACGCTCTTGTCTGTTGTAAAGGGTCTCCCGGGCTGTGGGTGGACGGTGTGCTGAGCTGCAGGACGAGGTCCTGGGCTGCTGGGCGAGGAGGCGGCCCTGGCTCAGTCCGTGGCGTTGGCTCCCGCAGGCCCGCCTTGGCCTCCACCCAGCTCACCAGCTTCTTCGGGGCGCTCGACTCCGTGCTGAGGTACCGGGCCACCGTGCTGCAGGCCTTCAGGGACATGAACCGCTTCACCGTGAACGAGACTGTGCTGTCCACCAGGGATGCCCTCGTCCTCCTGCACCAGTGGAGCCTCGTCGAGAGAGACGTCAGGCTCCAGGAGGACCTGAGAGCAGCCGCGGAGAGATGCCAAGTCAGGGAGCTGCTGAGTGAGTGTCGGACCCGCCCCCCAAGCTGTGCTCGCTGCCCCGCGGAGCAGCCTGCGTCTTACCGTCCCTGA

Related Sequences

bmy_01196T0 Protein

Length: 2117 aa      View alignments
>bmy_01196T0
MGGPKRKAPGGPDGSAPPAGAAKRARTEELTGVRFKAQLRDPQGAGPALEAFVSAAKKLPREDVYDVVEGYIKISVECAEIFQLLSGEKHPESEMLLIFQVFEAILLRTASDLSHFRVVGTNIVKKLMNNHMKLICESLYASGYRMARACLNLMAAMVTQGPEAARDVCSHFDLNKKTLYTLVTKRDSKGVHDVRLAYIQFALSFLIAGDDSTVAQVLELKEFIPCIFSSGMKEDRISTVNILLSTLKTKVVHNKNITKTQKVRFFTGQVLNHIASLYSWKGIVDVSLENVETSAEDAGKTMVRELVHNFLMDLCCSLKHGINFYDASLGTFGRGGNLTLLHFLLGLKTAADDELVAELVVNILKVCPDLLNKYFKEVTFSFLPRVQSTWSSNIKLLNKIYAAQPDISRAFQTREFIPLPRLLAMVMVTTVPLVCNKIMFTQALNLDSKSVKHTALSLISVILKRASKTIDYCLNKGAWQESGVYTAAMMEDFVRLFREALSKILPDLNAIVWVWQSLRKQETEQDDEKAKKRGNKTPATCVAPQSDDAETILLKAILLQVICLYQKVVPHVVMQYNFDFSKLLKGVISEEGLREEVPLTLQHLVLKVALALPASKFLWLKAQEGPDAEIIGGKRSVFYLLMKMFVTSSHSHLKSSTKLLIVKILRDTGLFEHTWQELELWLEHLDDTAEENKEAVIQFLERVLLTLVANPYSYTDKASDFVQEASALQASVTRQDADDVSIPISHIDDVLDMVDVLVEGSEGLDEEVGFLLNEDVILLTFPFSAVVPAALEARNKLLLGTESEAGESIVAYLTRVLTDLLHTQRDPLALCLLLQSYDKLEPPLPPCCRQLSRFNRYYSLWIPEPAREALALQTSGSPAPPDPPAPSFSALLQMAYAGQGQGQGQGQGQGALPLLDEGVQGQLRAALLQLPMHQALRSAKHLLLYIRSAVENFGQLGRRTGPPLLQFLLDLLRRLVIHCQQLDAQNQQKCQAAQAESDLFLDVESMASLELANDKAAFIRFLLVWGSLTESQSGPHRCTGEEVRYDGTLEEVLVAILKHPTLEGWYLALEQQALPPHTLSPVLVKLLAAHLSAAILPLLVASAPVLQGLGQLGLLARYSEAVTQSVLKELQNRRARAATPMPKTLPQLEALQGLHPYMEGAQLREVTLALLGLPEAHLVTQRPTKSRQKERHLNVLGETLVQLLTSHPQEQLESGELLWASEYVRGLGALLPALAVDELDAVLLQALQREPALAPAVGVALLDYCLARRTPAALGTAALLLQHSCPHVLRFERWCGRASLGLRLQEALDDFLPVVRTYLQRRTREHFTRPAGVSSAVIPVLRKALWRPLQTRLLSADGPLESGLHQEILAQLVPFARAKDLHVLMDRLPRLLQTPGSHKSWVVADSVLAVLEGSAEELRAWKKTLLEACVQWLIASFSGGQQDDGTQDREKQMLLRLNELLNSLNEVDPGDWQKFVKTGLKFRYQDHAFLKTLRAAVQLLYLPESAARSRLTQLSVVHMMLTQHSLFLPTLLTAGEEETPGSPIREALVDLMSVAVRLCPSVCESSHFAVLLGAYGASLSVLDQKILLLLRAYEQNNHSLVNFRLLPWGPAAVEHQKTCQSLGKSLWQQPSVGDILRLLDPDRMMKTVLHFPQNRRLLPPEDTQEPIFKDRSTMELSDLYDPCFLLHLFSELTRPEFVVDCRKFVDSNALGLTVTALSSYDPPMRAAAYSVLAAYYSQLEGARFREQPQVLYLLDVVRNGIRTKNMRLTFTLTLFIAKAALQILRPVSWLLGLQQKTEREWMFGLLRQGMRDKYCYQLCARRGVLHIVLSFFSSPLCDDVAQNWILEILQNAARDAKSAYEILRDYSLLTWILHILESKFLETQLLSNLISLLHTLWVTTLGDRGVEAGEQPPCKPGSQEPPKLLALHLVDEFLYVLLVLTKHLRVELRLRSPFCLPWRGSLFPALCAGLHALVCCKGSPGLWVDGVLSCRTRSWAAGRGGGPGSVRGVGSRRPALASTQLTSFFGALDSVLRYRATVLQAFRDMNRFTVNETVLSTRDALVLLHQWSLVERDVRLQEDLRAAAERCQVRELLSECRTRPPSCARCPAEQPASYRP*