Sequence detailsbmy_01200 (Coding sequence)

Part of scaffold_23 (SequenceType object (1))

For more information consult the page for scaffold_23 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNJ1ENSTTRG00000002222 (Bottlenosed dolphin)

Gene Details

synaptojanin 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002101, Bottlenosed dolphin)

Protein Percentage 90.52%
cDNA percentage 90.75%
Ka/Ks Ratio 0.2338 (Ka = 0.0147, Ks = 0.0631)

BT.103203ENSBTAG00000003063 (Cow)

Gene Details

synaptojanin-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003985, Cow)

Protein Percentage 95.58%
cDNA percentage 93.35%
Ka/Ks Ratio 0.1082 (Ka = 0.0236, Ks = 0.2184)

Additional orthologs identified in other species via the OPTIC pipeline.

SYNJ1 (Human)   Synj1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4383 bp    Location:319481..256975   Strand:-
Raw sequence 
>bmy_01200
TCAGCAGAAAAAGAAGCAATCAAGAGTACATACTCCAAAGTTCTAGATGCCTATGGACTTCTGGGTGTTTTACGATTAAATCTTGGTGATATTATGTTACATTATCTGGTCCTCGTCACTGGATGTATGTCTGTTGGAAAAATTCAAGAATCTGAAGTTTTCCGAGTTACTTCCACTGAATTTATATCACTACGAATCGATTCTTCAGATGAGGATCGCGTTTCAGAAGTGCGAAAAGTGTTGAATTCAGGAAACTTCTATTTTGCATGGTCCGCATCTGGAGTCAGTTTGGATCTGAGTCTTAATGCCCATCGTAGCATGCAAGAACATACAACCGATAATAGATTTTTCTGGAATCAGTCTTTGCACTTGCATCTCAAGCACTATGGTGTGAATTGCGATGACTGGTTATTACGCCTCATGTGTGGGGGAGTAGAAGTCAGAACAATTTATGCTGCTCATAAACAGGCAAAGGCTTGCCTCGTTTCCAGGCTAAGCTGTGAACGAGCTGGGACCAGGTTCAACGTAAGGGGAACCAATGATGACGGTCACGTCGCCAATTTTGTAGAAACAGAACAGGTTGTGTACTTAGATGACTGTGTTTCTTCCTTCATACAAATCCGGGGGTCTGTCCCATTGTTCTGGGAGCAACCAGGGTTGCAGGTGGGATCTCATCGTGTTCGTATGTCAAGGGGGTTTGAAGCCAATGCGCCTGCTTTTGACAGGCATTTTAGAACACTTAAGAATTTATATGGTAAACAAATAATAGTAAATTTGCTTGGATCTAAGGAAGGGGAACATATGCTAAGTAAGGCTTTCCAGAGTCATTTGAAAGCTTCTGAACATGCAACTGATATCCAGATGGTGAATTTTGACTATCATCAAATGGTTAAAGGAGGAAAGGCAGAAAAATTACATAGTGTTCTTAAACCTCAAGTCCAGAAGTTTCTGGATTATGGATTTTTTTATTTCAATGGAAGTGAAGTTCAAAGATGCCAGAGTGGTACAGTTCGAACAAACTGCTTGGATTGTCTTGATAGAACAAATAGTGTGCAGGCATTCCTTGGCTTAGAGATGCTAACTAAACAATTGGAAGCTCTCGGCTTAGCTGAAAAGCCTCAGCTGGTGACTCGCTTTCAAGAAGTTTTTCGATCAATGTGGTCTGTGAATGGTGATTCAATCAGTAAGATTTATGCAGGAACTGGAGCTCTTGAAGGAAAGGCTAAGGCTGGAAAGTTAAAAGATGGTGCTCGTTCTGTTAGTAGAACAATTCAGAATAACTTCTTTGACAGCTCCAAGCAAGAGGCCATTGATGTTTTGCTACTGGGAAATACTTTAAATAGTGATTTAGCTGACAAAGCTCGAGCCCTTTTAACTACTGGAAGTTTGCGTGCATCTTCTAAAGTTCTAAAGAGCATGTGTGAGAATTTCTACAAGTATTCAAAGCCCAAGAAAATTCGAGTATGTGTGGGCACCTGGAATGTGAATGGCGGGAAGCAGTTTCGCAGCATAGCTTTTAAGAATCAGACCCTCACTGACTGGCTTCTTGATGCACCCAAGTTAGCTGGCATCCAGGAGTTTCAAGATAAAAGAAGTAAACCAACTGATATATTTGCCATTGGTTTTGAGGAAATGGTAGAGTTGAATGCTGGAAACATTGTGAATGCAAGCACAACAAATCAGAAGCTCTGGGCCGTGGAACTTCAGAAGACCGTCTCCAGAGACAACAAGTATGTGCTGCTAGCCTCCGAGCAGGATGTTGCAGTTGATACTGTGAAGACTGGAATGGGAGGCGCAACTGGAAATAAGGGAGCGGTCGCAATACGAATGCTGTTCCACACCACAAGCCTCTGCTTCGTCTGCAGCCACTTTGCTGCAGGACAATCGCAAGTCAAAGAACGAAATGAAGATTTTGTGGAAATAGCGCGGAAGTTGAGTTTTCCAATGGGAAGGATGCTGTTCTCCCATGACTACGTATTTTGGTGTGGTGATTTCAACTACCGAATCGATCTTCCTAATGAAGAAGTAAAAGAGCTCATAAGACAGCAAAATTGGGATTCTCTTATAGCAGGAGATCAGCTTATCAACCAGAAAAATGCTGGACAGATTTTTAGAGGATTTTTAGAAGGAAAAGTAACCTTTGCTCCAACATATAAATATGATTTGTTTTCTGATGACTACGACACCAGTGAAAAGTGCCGCACCCCTGCATGGACAGACCGTGTCCTCTGGAGAAGAAGGAAATGGCCTTTTGATAGATCAGCTGAAGATTTAGATCTCCTAAATGCTAGTTTTCAAGATGGAAGCAAAATCCTCTACACGTGGACTCCTGGCACTTTGCTGCACTATGGAAGGGCCGAGCTGAAGACTTCTGACCATAGGCCTGTCGTTGCCCTGATTGATATCGATATATTTGAAGTGGAAGCTGAAGAGAGGCAAAGCATTTATAAAGAAGTAATTGCCGTTCAGGGTCCACCAGATGGTACGGTGTTGGTCTCAATCAAAAGTTCTCTACCAGAAAATAATTTTTTCGATGATGCTTTGATTGATGAACTTCTGCAACAGTTTACAAATTTTGGTGAAGTTATACTCATAAGATTTGTAGAAGATAAGATGTGGGTTACATTTTTGGAGGGAAGCTCTGCCTTGAGTGTTCTGAGCCTGAATGGTAAAGAGTTATTGGGTCGGACTATAACTATTACTTTAAAGAGTCCAGACTGGATCAAAACTTTGGAAGAAGAAATGAGTTTAGAGAAAATCAGCGTCCCCTTGCCGTCCTCAACAAGCTCCACCCTGCTGGGTGAAGACGCGGAGGTCGCGGCCGACTTCGATATGGAAGGTGATGTTGATGACTACAGTGCTGAGGTAGAGGAAATCCTTCCTCAGCATCTCCAGCCATCTTCCAGTTCTGGCCTTGGCACTTCCCCAAGTTCTTCACCCCGGACCAGTCCCTGCCAGTCACCTACCATATCAGAGGGGCCTGTGCCTTCCCTTCCTGTGAGACCAAGTCGAGCTCCATCAAGAACACCTGGGCACCCAGCTTCACAAAGTTCTCCTGTTGACACTCTGCTAGCAACACAACTGCAGCAGAAAGATTCTTCCCAGCCCCTGGAACCCAAGCGGCCTCCCCCTCCCCGCCCGGTTGCTCCTCCTGCGCGTCCAGCCCCCCCACAAAGACCGCCTCCACCTGCAGGGGCTAGGAGTCCTGCACCTGCTAGAAAAGAATTTGGAGGTATTGGAGCCCCTCCCAGTCCTGGGATTATTCCACCCCGTGCCGGAGTGATCAGCGCCCCCCAGAGCCATGCTCGGGTGTCTGCTGGGAGACTGACTCCTGAAAGCCAAAGCAAACCGTCAGAAGTACTGAAAGGGCCAGCTCTTCTTCCTGAACCACTGAAGCCTCAGGCCGCCCCTCCTGTGCAGCCTTCTCTGGCCCCGCCAGTTCAGCAGATGCGGGAGCCTCGTGTCCCGGTGGCCACACCTATGCCTCAGTCTGCCCCGCAGCCCAGCCTCGAAGCCATCCCGCAGCCGCCCCCTCGGAGCAGGTCGTCCCACAGCTTGCCTTCTGAACCTTCAGTGCAGCCGCAGGTAAAAACAAACGGAGTCTCTGCCATCAGACTGGACTCGCCATTAAAGACTGACCCATTTGAAGACCTGTCATTGAACCTGCTTGCTGTATCAAAGGCTCAGCCATCTGTTCAAACCCCAGACCCAAAGGGGTTGATTTCATTGCCTTCTGCAACCCCAAGTAACATGAATACTTTGAGTTCTGTAAGCTGCATGCTGACAATGCCTCCAATTCCAGCCCGGAGTAAATCCCAGGAAAACACGCGATGTTCTCCAAACCCATTCATTGAGAGCTCGAGCAGCACAAATCCGTTCACCGACAGGACTGCCGCTCCCAGAAACCCCTTTAGAGCTGAATCTCAAGCATCAGAGGCCACTTCGTGGTTCTCCAAAGAAGAGCCCGTTGCTCAGAGTCCTTTTCCTTCTCCGAAGCCTCCCGGACAGAACAGCAGCAAGCCTTCATCTTCACTGGGTGGCTTTGAGGACAGTTTTGACCCGCAGGGCCCACCTACGTTAAAAAGCAGCAACCCAAAAGGATGGGTAACCTTCGAGGAAGAAGAGGACTTTGGTGTGACAGGAAAGTCAAGGTCCACTTGTCCAGACCTACTGGGTGATCAGCCGAGTTCATCTTCTGGCTCCAAGGTGACCTTTAGTGATGACTGGAATAAAGGTACCAGTGTCTCTTTCTGTGTGTTGCCAGCAAGAAGACCACCTCCGCCTCCTGCCCCTCTGCTCCCACCTGGCACCACCCCTCCAGCAGACCCTTTCACAGCCTTGGCCTCTAAGGCATCACCCACGCTAGACTTTACAGAAAGATAA

Related Sequences

bmy_01200T0 SequenceType object (3)

Length: 1461 aa      View alignments
>bmy_01200T0
SAEKEAIKSTYSKVLDAYGLLGVLRLNLGDIMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRVSEVRKVLNSGNFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEVRTIYAAHKQAKACLVSRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLDDCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHATDIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVSRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKTVSRDNKYVLLASEQDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQSIYKEVIAVQGPPDGTVLVSIKSSLPENNFFDDALIDELLQQFTNFGEVILIRFVEDKMWVTFLEGSSALSVLSLNGKELLGRTITITLKSPDWIKTLEEEMSLEKISVPLPSSTSSTLLGEDAEVAADFDMEGDVDDYSAEVEEILPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPGHPASQSSPVDTLLATQLQQKDSSQPLEPKRPPPPRPVAPPARPAPPQRPPPPAGARSPAPARKEFGGIGAPPSPGIIPPRAGVISAPQSHARVSAGRLTPESQSKPSEVLKGPALLPEPLKPQAAPPVQPSLAPPVQQMREPRVPVATPMPQSAPQPSLEAIPQPPPRSRSSHSLPSEPSVQPQVKTNGVSAIRLDSPLKTDPFEDLSLNLLAVSKAQPSVQTPDPKGLISLPSATPSNMNTLSSVSCMLTMPPIPARSKSQENTRCSPNPFIESSSSTNPFTDRTAAPRNPFRAESQASEATSWFSKEEPVAQSPFPSPKPPGQNSSKPSSSLGGFEDSFDPQGPPTLKSSNPKGWVTFEEEEDFGVTGKSRSTCPDLLGDQPSSSSGSKVTFSDDWNKGTSVSFCVLPARRPPPPPAPLLPPGTTPPADPFTALASKASPTLDFTER*