Part of scaffold_23 (Scaffold)

For more information consult the page for scaffold_23 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAXBP1 ENSTTRG00000002251 (Bottlenosed dolphin)

Gene Details

PAX3 and PAX7 binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002109, Bottlenosed dolphin)

Protein Percentage 98.93%
cDNA percentage 98.5%
Ka/Ks Ratio 0.11306 (Ka = 0.005, Ks = 0.0444)

BT.39483 ENSBTAG00000003064 (Cow)

Gene Details

GC-rich sequence DNA-binding factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003986, Cow)

Protein Percentage 97.5%
cDNA percentage 95.48%
Ka/Ks Ratio 0.0658 (Ka = 0.0116, Ks = 0.1768)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2529 bp    Location:383853..349970   Strand:-
>bmy_01202
ATGTTCCGAAAGGCCCGGCGAGTGAACGTGCGTAAGCGGAATGACTCGGAGGAGGAGGAGCGAGAGCGCGACGAGGAGCAGGAGCCGCCGCCGTTGCTGCCGCCGCCGGGCACCGGCGAAGAGCCGGGCCCCGGCGGCGGCGACAGGGCCCCCGGGGGGGAGTCGCTGCTGGGCCCGGGGCTGCCGCCTCCTTCCGCGCTGACCTCGGGCCCCGGGATTGAAGCCGGGGGCTGCTTCCCGGGAGGCGCGGAGCCCGGTAACGGGCTGAAGCCGCGCAAGAGGCCACGAGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGATGAGGAAGAAGAAAGTGAAGAAGTTTTCAAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTTAAGAAAGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACAGAAATCAACTCATCAGCTGACAACGAACCTCCTTTGGACAAAACAGGTCATGTTAAGGACACCAGTCAAGAAGATGGAGTTATCATCAGTGAACACGGGGAAGATGAAATGGATATGGAAAGCGAGAAGGAGGAAGAAAAGCCAAAGGCTGCCGGAGCCTTTTCAAATGCTTTATCTTCTTTGAATGTTCTCCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACACGCTGCAAGGAAAAAACGTCAGATGGCCCGGGAATTGGGAGATTTCACTCCTCATGATAGTGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGATGATGAGAAACGCCGTATAGTTTTTTCTGTGAAAGAAAAATCACAAAGACAGAAAATTGCGGAGGAAATAGGTATTGAGGGGAGTGATGATGATGCTTTAGTAACTGGAGAGCAAGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGAAAAGGAATTAATATCCCTCAGGTTCAAGCAAGTCAGCCCACTGAAGTGAACATGTACTACCAGAACACTTACCAGACAATGCCTTACGGTTCATCCTATGGCATTCCTTATAGTTACACAGCCTACGGATCATCCGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTGGTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAACTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGAGTGGACTCCACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGGTGCCACTGATTAATGAACTTGAATCAGCAATACATCAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGATATTAAAGATGAATCTTCGGAGTTTTCAAGCCATTCAAATAAAGCTCTGATGGCACCAAATCTTGATTCCTTTGGACGAGATCGGGCACTGTATCAAGAGCATGCAAAACGTCGGATTGCAGAACGGGAGGCGAGAAGGACTCGTCGTAGACAAGCCAGAGAGCAAACTGGTAAGATGGCAGATCACCTTGAAGGCCTTTCCAGTGATGATGAAGAAACGTCTACAGATATTACAAATTTCAATCTGGAAAAAGATCGCATTTCAAAAGAGTCCAGCAAGGTTTTTGAAGATGTCCTTGAAAGTTTCTATTCAATCGATTGTATTAAATCCCAGTTTGAAGCATGGCAGCGAGAGCAAGAAAAAGATGATGTAGATGTTGCACTGTTACCGACCATTGTGGAAAAGGTGATTCTCCCTAAACTAACAGTGATAGCTGAAAATATGTGGGACCCCTTTTCTACAACACAGACTTCAAGAATGGTTGGAGTTACTCTAAAATTAGTAAATGGATATCCTTCAGTAGTGAATGCAGAAAACAAAAATACACAGGTTTACCTAAAAGCGCTTCTATTGAGAATGAGGAGAACTTTAGATGATGATGTATTCATGCCCTTGTATCCCAAAAATGTCTTGGAAAATAAAAATTCTGGGCCTTACTTGTTTTTTCAACGACAGTTTTGGTCTTCAGTTAAGGAATTATCAATAGACGGTTTATTAAATAGATACATTCTCATGGCTTTTCAGAATTCAGAATATGGCGATGACAGCATCAAAAAAGCCCAAAATGTAATCAGTTGTTTCCCCAAGCAGTGGTTCATGAATCTGAAAGGAGAAAGAACTATTTCTCAGTTAGAAAACTTCTGTCGATACCTTGTACACTTAGCAGATACAATTTACAGAAACAGTATCGGGTGCTCTGATGTGGAAAAAAGAAATGCAAGGGAAAACATAAAACAGATAGTAAAACTCCTTGCAAGTGTTCGAGCTCTGGATCACGCTATATCTATTGCAAGTGACCACAATGTGAAAGAATTTAAGTCTTTGATCGAAGGAAAATAG

Related Sequences

bmy_01202T0 Protein

Length: 843 aa      View alignments
>bmy_01202T0
MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEPGPGGGDRAPGGESLLGPGLPPPSALTSGPGIEAGGCFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEESEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTEINSSADNEPPLDKTGHVKDTSQEDGVIISEHGEDEMDMESEKEEEKPKAAGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDSEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPTEVNMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESSKVFEDVLESFYSIDCIKSQFEAWQREQEKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGVTLKLVNGYPSVVNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKELSIDGLLNRYILMAFQNSEYGDDSIKKAQNVISCFPKQWFMNLKGERTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNARENIKQIVKLLASVRALDHAISIASDHNVKEFKSLIEGK*